KEGG   Seriola dumerili (greater amberjack): 111223086
Entry
111223086         CDS       T05606                                 
Symbol
yars
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic
  KO
K01866  tyrosyl-tRNA synthetase [EC:6.1.1.1]
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    111223086 (yars)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sdu01007]
    111223086 (yars)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sdu03016]
    111223086 (yars)
   03029 Mitochondrial biogenesis [BR:sdu03029]
    111223086 (yars)
Enzymes [BR:sdu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.1  tyrosine---tRNA ligase
     111223086 (yars)
Amino acid related enzymes [BR:sdu01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   111223086 (yars)
Transfer RNA biogenesis [BR:sdu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    111223086 (yars)
 Prokaryotic type
    111223086 (yars)
Mitochondrial biogenesis [BR:sdu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    111223086 (yars)
SSDB
Motif
Pfam: tRNA-synt_1b tRNA_bind
Other DBs
NCBI-GeneID: 111223086
NCBI-ProteinID: XP_022602833
Position
Unknown
AA seq 533 aa
MADQLSPDEKFDLITRNLQEVLGEEKLKQVLQERELKVYWGTATTGKPHVAYFVPMSKIA
DFLKAGCEVTILFADLHAYLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLEKLKFVKG
TDYQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVD
AQFGGVDQRKIFTLAEKYLPSLGYAKRAHLMNPMVPGLTGTKMSSSEEESKIDLLDSKED
VKKKLKKAFCEPGNIQNNGVLSFVKYVLFPLRGEFCIKRDPKWGGDKVYTGFEEVEKDFA
EESVHPGDLKASVEVALNQLLDPIRKKFESPELRKLTNTAYPNPSKTKAGGKGAKAGGGG
GGGDDDELAPSRLDIRVGKVISVEKHPDADSLYLEKIDVGETEPRTVVSGLVAYVSQEDL
QDRMVLLLCNLKPQKMRGIESQAMLLCASVEGEPRRVEPLDPPEGSSPGEQVFVEGYETG
KADDRLNPKKKVWEKLQVDLKVSDECVAQWKDKQLMTKLGQITCKTLKGGNIS
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggcagatcagctgagtcctgatgagaagttcgacctcatcactaggaacctccaggag
gtcctgggagaggagaagctgaagcaggttcttcaggagagagagctgaaagtttactgg
ggtacagcgaccacaggaaaaccccatgtcgcttactttgtccccatgtccaagatagca
gacttcctgaaggctggatgtgaggtcactattctgtttgcagacctgcatgcctacctt
gacaacatgaaagccccctgggagctgctggagctcagggtgaagtactatgaacaggtc
atcaaggccatgttggagagcattggtgtgccactggaaaaactcaagtttgtcaaagga
acggactaccagctcagcagagagtacactctggacgtgtaccgcctgtcctccatggtg
acagagcatgatgctaagaaggccggagctgaggttgttaaacaggtggagcatcctcta
ctgagtggtctgctctaccctggactgcaggctctggatgaggagtacctgaaggtggat
gcccagtttggaggagttgaccagaggaagattttcaccctggcagagaagtacttgccc
tctcttggctatgctaaacgtgcccatctgatgaacccaatggtaccaggactgacagga
accaagatgagctcttcagaagaagaatcaaagattgacctactggactctaaagaggat
gtgaagaagaagctgaaaaaggctttctgcgagccaggaaacatccagaacaacggagtc
ctctcctttgtcaaatacgtcctcttccctctgcgtggagagttctgcatcaaaagagac
cccaagtggggtggagataaagtctacacgggatttgaagaggtggagaaggactttgct
gaggagtcggtccatccaggagacctgaaggcctcagtggaagtcgcactaaaccaactg
ctggatccaatcagaaagaagtttgagtcgcctgagctccgcaagcttaccaacactgcc
taccctaacccttcaaagacaaaagcgggaggaaagggtgccaaggccggtggaggagga
ggaggaggagatgatgatgagctggccccctccagattggacatcagagtgggcaaggtc
atcagtgtggagaagcatccagacgctgattcactgtacctggagaagatcgacgtgggc
gagacggagcccaggacggtagtcagtgggctggtggcctatgtttcacaggaggacctg
caggacagaatggtgttgttgctgtgcaatctcaaaccccagaagatgcgagggatcgag
tcgcaagccatgctgctgtgtgcctctgttgaaggggagccaaggagggtggagcctcta
gaccctccagagggttcgtcaccaggggaacaggtctttgtggagggatatgagacaggc
aaagcagacgacagactcaacccaaagaagaaggtgtgggagaaactacaggtcgacctg
aaggtctcagacgagtgtgtagctcagtggaaagacaagcagctgatgaccaaactggga
cagatcacatgtaaaacactgaaaggaggcaacatcagttaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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