KEGG   Seriola dumerili (greater amberjack): 111226429
Entry
111226429         CDS       T05606                                 
Symbol
csf1r
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor isoform X1
  KO
K05090  macrophage colony-stimulating factor 1 receptor [EC:2.7.10.1]
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04010  MAPK signaling pathway
sdu04060  Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    111226429 (csf1r)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    111226429 (csf1r)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:sdu01001]
    111226429 (csf1r)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:sdu04090]
    111226429 (csf1r)
Enzymes [BR:sdu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     111226429 (csf1r)
Protein kinases [BR:sdu01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   111226429 (csf1r)
CD molecules [BR:sdu04090]
 Proteins
  111226429 (csf1r)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase Ig_3 I-set ig Ig_2 C2-set_2 VEGFR-1-like_Ig-like Pkinase_fungal
Other DBs
NCBI-GeneID: 111226429
NCBI-ProteinID: XP_022607290
Position
Unknown
AA seq 977 aa
MQSYLTVLLGIVASAASAEWSRPVIKFNSKVVGSSELVVKPGTPLDLRCEGDGPVNWQTR
LAKHRRYVSKGNGNVRTLKVDRPSAEFTGTYKCFYVAQHRDLTSSVHVYVKDPNRVFWTS
STSLRVVKKEGEDYLLPCLLTDPAATDLGLRMDNGTTVPPGMNFTVDRHRGILIHSLHPS
FNADYVCTAKVNGVERTSKAFSINVIQKLRFPPYVFLETDEYVRIVGEELKIRCTTHNPN
FNYNVTWKYTTKSKPTIEERVRSGGENRLDIQSILTIPAVDLADTGNISCIGTNEAGVNS
STTYLLVVDKPYIRLLPQLSPKLAHQGLSVEVNEGEDLELSVLIEAYPHITEHKWHTPTS
PNTSTQEHKFIRYNNRYHATLQLKRMNAQEQGQYTFHARSDLANASITFQVQMYQRPVAV
VRWENVTTLTCTSFGYPAPRIVWYQCFGIRPTCNENTSGLQMAIPLQAPTVEVQRKEYGA
VGVESVLTVGPSSQRMTVECVAFNLVGVSSDTFAMEVSDQLFTSILAGAAGILSILLVLL
IFLFYKYKQKPRYEIRWKIIEARDGNNYTFIDPTQLPYNEKWEFPRDKLRLGKILGAGAF
GKVVEATAYGLGKEDNVMRVAVKMLKASAHSDEREALMSELKILSHLGHHKNIVNLLGAC
TYGGPVLVITEYCSLGDLLNFLRHKAETFVNFVMNIPDIMESSNDYKNICNQKQFIRSDS
GISSASSSSYMEMRPSQLPIMESPQDPVCEETGDWPLDIDDLLRFSFQVAQGLDFLAAKN
CIHRDVAARNVLLTNRREAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYT
VQSDVWSYGILLWEIFSLGKSPYPSMAVDTRFYKMVKRGYQMSQPDFAPPEIYMIMKMCW
NLEPTERPTFSKISQMIERLLGDQPEQEQLIYQNVQQQVTEGEVCDEPKCCDGPCDQSCD
HEEEEQPLMKTNNYQFC
NT seq 2934 nt   +upstreamnt  +downstreamnt
atgcagtcatacctcacggtgctgctggggattgtggcctctgctgcttcagcagaatgg
agtcgtccggtgatcaagttcaactctaaggtggtgggcagttctgagctagtggtcaaa
cccgggacccctcttgatctgaggtgtgagggtgacggtccagtaaactggcaaaccagg
ctagccaagcacagacgctacgtgtccaagggcaacgggaacgtccgcaccctaaaggtg
gaccgtccctctgcagagttcactggaacgtacaagtgtttttacgttgctcagcatcgt
gacctgacctcttcagtgcatgtgtacgtaaaagatccaaaccgtgtgttctggaccagc
agcacatccctgcgggtggtgaagaaagaaggtgaggactacctgctgccctgcctgctg
accgacccagcagccacggacctgggcctccgcatggacaatggcaccaccgtaccacca
ggcatgaacttcacagttgaccggcaccgtggtattctcatccacagcctccaccccagc
ttcaacgctgactatgtctgcacagccaaggtcaacggagtggagaggacctccaaggcc
ttttccatcaatgtcattcagaagcttcgtttccctccatatgtcttcttggagacagat
gagtatgtgcgcatcgttggggaggaactcaagattcgctgcaccacacacaaccccaac
ttcaactacaatgtcacctggaaatacaccaccaagtcgaaaccgaccatcgaggagagg
gttcgctctggtggagaaaaccggctggacatacagagcatactgaccatccctgctgtg
gacctcgcagacacaggaaatatttcctgcattggtaccaatgaagcaggggtgaacagt
tcaaccacatacctgctggttgtggacaagccctacatcaggctgttgccccagctgtcc
cctaaactggcccaccagggtctttcggtcgaggtgaatgagggagaagatctggagctc
agtgtgctcatcgaagcgtaccctcacatcacagagcacaaatggcacacacccacatct
cccaacacgtccacacaggagcacaagttcatccgatacaacaacagataccatgccact
ctgcagctgaagagaatgaatgcacaggagcagggccagtacacctttcatgcccggagt
gacttggctaatgcatcgatcacattccaagtccaaatgtatcagagaccagttgctgtg
gtgagatgggaaaatgttaccacactcacttgcacctcatttgggtatcccgctcccaga
attgtctggtaccagtgttttgggatacgacctacgtgcaatgaaaacacctcagggctt
cagatggcgatccctctccaggctcccacagtggaggtccagaggaaggagtatggggcc
gtgggggtggagagcgtcctcactgtggggccgtccagtcagaggatgacggtggagtgc
gtggccttcaaccttgtcggtgtcagcagcgacacttttgccatggaggtttctgatcag
ctcttcacttccattctggctggagcagcagggattctgtccatcctccttgtgctgctg
attttcctgttttacaaatataagcagaaacccaggtatgagatccgatggaagatcatt
gaggcgagagatggaaacaactacacctttattgaccccactcagctgccttacaatgag
aagtgggagttcccaagagacaagctgaggctaggaaagatcctgggcgcaggagctttt
ggaaaggtcgtcgaggccacagcctacggtctgggaaaggaagacaatgtgatgcgtgtg
gctgtgaaaatgttaaaagccagtgcccattcagatgagagggaggctctgatgtctgaa
ctgaagatcctgagccacttgggacaccacaagaacattgtcaatcttctgggagcctgc
acctatggaggaccagtgcttgtgatcacagagtactgcagccttggtgacctcctcaac
ttccttcgtcacaaggcagagacatttgtgaactttgttatgaacattcccgacatcatg
gagagctcaaatgactacaagaacatctgcaatcagaaacagttcattagaagtgacagt
gggatctccagtgcatcatcgagcagttacatggagatgaggcccagccagctgccaatc
atggaatcacctcaagaccctgtgtgtgaggagactggtgactggccgctggacattgat
gacttactgaggttttcttttcaagtggctcagggccttgactttctggctgccaaaaat
tgtattcaccgagatgtggctgccaggaatgtcctcttgaccaaccgcagagaggccaaa
atttgtgactttggcctggcacgtgacatcatgaatgactccaactacgtggtgaagggc
aatgcacgtctgccagtgaagtggatggctccagagagtatttttgactgtgtgtacacc
gtccagagtgatgtctggtcctatggcatcctcctgtgggagatattctctttaggcaag
agcccctaccccagcatggctgtggacaccagattctacaagatggtgaagcgcggctac
cagatgtcccaaccagactttgccccacctgaaatttacatgatcatgaagatgtgctgg
aatctggagcccacggagcgtcccacgttcagcaagatcagtcagatgatagagagacta
cttggggaccaacctgagcaggaacagctaatctaccagaatgtgcagcagcaggtcaca
gagggtgaagtgtgtgacgaacccaagtgctgtgacggcccctgtgaccagtcttgtgac
cacgaggaagaggagcagccactgatgaagaccaacaactaccagttttgttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (27)   

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