KEGG   Seriola dumerili (greater amberjack): 111227236Help
Entry
111227236         CDS       T05606                                 

Definition
(RefSeq) voltage-dependent calcium channel gamma-5 subunit
  KO
K04870  voltage-dependent calcium channel gamma-5
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04010  MAPK signaling pathway
sdu04260  Cardiac muscle contraction
sdu04261  Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    111227236
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    111227236
   04261 Adrenergic signaling in cardiomyocytes
    111227236
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:sdu04040]
    111227236
Ion channels [BR:sdu04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   111227236
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: PMP22_Claudin Claudin_2 COPI_assoc DUF716 FtsX DHHC Claudin_3
Motif
Other DBs
NCBI-GeneID: 111227236
NCBI-ProteinID: XP_022608390
Position
Unknown
AA seq 276 aa AA seqDB search
MSACSRKALTLLSSVFAISGLGLLGVAVSTDYWLYLEEGVIMPLNQSTDIKASLHSGLWR
VCFLAGDESGRCFTIEYIMPMNVQLTSESTVNVLKMIRSATPFPLVSLFFMFIGFVLSNI
GHVRPHRTILAFVSGIFFILSGLALVVGLVLYISSINDEMLNRTKSSEAYFTYKYGWSFA
FAAISFLLTESAGVMSVYLFMKRYTAEEIYQPRHPSFYRPRLSNCSDHSGQFLHPEAWSR
GRSPSDISSEASLQMSASYPALLKCPDYDQVSSSPC
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgagcgcgtgcagcaggaaggccctgacgttgctgagcagtgtctttgcaatcagtggc
ctggggctcctgggagtggcagtcagcaccgactactggctgtacctggaggaaggcgtc
attatgcctctaaaccagagcactgacatcaaggcctcactgcactcgggcctctggaga
gtctgcttcctggccggtgatgagtctggtcggtgctttaccatcgagtacatcatgccc
atgaacgtccagttgacgtcagagtccacagtcaacgtgctcaaaatgatccgctcagcc
actccattccctctggtcagccttttcttcatgttcatcggttttgtcctcagcaacatc
gggcatgttcggccacaccgcaccatcctggcctttgtctctggaatcttctttatcctc
tcaggtctagctctggtggtgggcctggtgctctatatttccagtataaatgatgaaatg
ctgaacaggactaaaagcagcgaggcctattttacctacaaatacggctggtccttcgcc
ttcgctgccatctccttcctgctcactgagagtgcaggcgtcatgtctgtctacttgttc
atgaagcgctacacagcagaggagatctaccagcctcgccaccccagtttctaccgccct
cgtctcagcaactgctccgaccactcaggccagttcctccacccagaggcttggtcacgc
ggacgaagtccctcagacatctccagtgaagcttcactgcaaatgagtgccagctaccct
gctctcctcaaatgccccgactatgatcaggtgtcgtcttcaccctgttga

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