KEGG   Seriola dumerili (greater amberjack): 111235311
Entry
111235311         CDS       T05606                                 
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
  KO
K18994  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:5.6.2.6]
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sdu03041]
    111235311
Enzymes [BR:sdu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     111235311
Spliceosome [BR:sdu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    111235311
SSDB
Motif
Pfam: OB_NTP_bind HA2_C HA2_N
Other DBs
NCBI-GeneID: 111235311
NCBI-ProteinID: XP_022619451
Position
Unknown
AA seq 736 aa
MAHDVSSLTGEEYFEGKSPLCPDTDASSHGDKDYDDILELNQFDGLPYSSRFYKLLKERK
ELPVWKAKCEFMDTLAKGQFVVVSGSAKTGRSSQIPQWCAEFCLSVQFQHGMVVCTQTHT
QQAVDLALRVADEMDVNIGHEVGYSIPLDTCCTGDTVLRYCTDDMLLREMMSDPLLENYS
VVVVDQAHQRTVATDVLQGLLKDIALQRPELRVVLLTSGEPGPKQLAHFSGSAAPLIHLE
SPVAGEVVYSSTGGGYFCSALRLVLEIHHSEEEGDVVVFLVTTQEIDLAHDILRHEVHSL
PRDLGELLPVAVHPGRPGNLPIPGEEETGRTRRVFLTSSPNEDFFWAVRSISFVIDAGLE
KRYVYNPRIRTNSVIIQPISKGQAESRKQLATGPTGKCFCLYPEDRQLPAEVRPHIVESD
ITSTVLFLKRMEIAGLHHCHFLDRPDPGGLMQALEELDYLAALDNDGNLSEMGIIMSELT
LEPQMAKTVLASCEFDCVSEVVIIAAMLTAPTCFMVPSVDLKPEATQCHMKFQHPEGDHF
TLINIYKAFKQCQQDPYCNVEKWCKDFYLNHTSLLMADALRSELTDILKRIELPVSVPAF
GSRSNTFNIKRALLAGFFMQVARDVDGSGNYFIMTHKHVAQIHPLSGYGAKSPKLGLPEW
VLFHEHSFSEDNCLRTVTHITPEEFIQMAPQYFFYNLPPSESKDILQNILNHGASTPPTS
QQEPQEDQTNDRCVIQ
NT seq 2211 nt   +upstreamnt  +downstreamnt
atggcgcacgacgttagcagtttaactggagaggagtattttgaagggaaatcacccctt
tgtccagacacagacgcttcgagtcacggggataaagactatgatgacattttggagctt
aatcagtttgatggactgccttattcctccaggttttacaaactgctgaaagaaagaaaa
gagctgccagtgtggaaagcaaaatgtgaattcatggacactttggccaaagggcagttt
gttgttgtcagtggttctgctaaaactgggaggagttctcaaattccccagtggtgtgcc
gagttctgcctgtcagtccagttccagcacggcatggtggtttgtacccagactcacacc
cagcaggctgttgatctcgccttaagggtggccgatgagatggacgtcaacattggccat
gaagtcgggtacagcatccctttggacacatgctgcaccggcgacacagtcctcaggtac
tgtacagatgacatgctgctgagagagatgatgtcagaccctttacttgagaactacagc
gtggtagtcgtggaccaggcccaccagaggaccgtagccaccgacgtactgcagggtctg
ctgaaggacatcgccctgcagaggccggagctccgtgtggtcctcctcacctcgggcgag
cccggccccaagcagctggcccacttctccgggtcagcggcgcctctgattcacctggag
agccccgtcgcaggagaggtggtgtacagcagcacaggtggaggctacttctgctctgct
ctccgtctggtgctggagattcaccactccgaagaggaaggagatgtggttgtgtttctg
gtgacgacacaggagatagatctggcccatgacatcctgcgtcatgaggtgcacagctta
ccccgtgacctgggtgagctcctgcctgttgctgtgcaccctggccggcctgggaatctc
ccaatcccgggggaggaggagacgggccggacccgcagagtattcctcacatccagccca
aacgaggacttcttctgggctgttagatcaatcagctttgtcattgatgccggccttgag
aaaagatatgtttacaaccccaggatcagaacaaactcggtcatcattcagccaatcagc
aaaggtcaggccgagagtcgcaaacagctggcgacaggtccgacaggcaagtgtttctgt
ctgtacccagaggacagacagcttcccgccgaggtacgaccacacatcgtggagtcagac
atcacttccactgtgctcttcctgaagaggatggagatcgcagggctgcaccactgtcac
ttcctcgacaggccagatcctggaggtctgatgcaggctttagaagagctggactatctg
gcagctttggataatgatggcaacctgtctgagatgggcatcatcatgtccgagttaacc
ttggagccgcaaatggccaagactgtgctcgcctcctgtgagtttgactgtgtcagcgag
gtggtcatcatcgccgccatgctaacagcaccaacttgcttcatggttccctctgtggac
ctgaagccagaggccacccagtgccacatgaagttccagcacccagagggagaccacttc
acccttatcaatatctacaaggcctttaagcagtgccagcaggatccatactgtaatgtg
gagaagtggtgtaaggatttctacctgaaccacacttctctgctgatggctgacgcgctt
cgttctgagctcaccgacattctgaagaggatcgagctgcccgtctcagtgcccgccttc
ggttcccgaagcaacaccttcaacattaagagagccctgctggcaggtttctttatgcag
gtggcgcgggatgtggatgggtcagggaactacttcattatgacccataagcatgtggca
cagatccatcctctgtctggctacggagccaagagccccaagctgggcctgccggagtgg
gtgctgttccatgagcactccttctccgaggacaactgtctccgcaccgtcacccacata
acaccggaggagttcattcagatggcaccacagtatttcttctacaatctaccgccaagc
gagagcaaagacatcctccaaaacattttgaaccatggagcttcgacacctccaacctcc
caacaggaaccccaagaggaccagaccaatgaccgttgtgtcatacagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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