KEGG   Seriola dumerili (greater amberjack): 111236338
Entry
111236338         CDS       T05606                                 
Symbol
usp43
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43
  KO
K11856  ubiquitin carboxyl-terminal hydrolase 43 [EC:3.4.19.12]
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sdu01002]
    111236338 (usp43)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sdu04121]
    111236338 (usp43)
Enzymes [BR:sdu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     111236338 (usp43)
Peptidases and inhibitors [BR:sdu01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   111236338 (usp43)
Ubiquitin system [BR:sdu04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    111236338 (usp43)
SSDB
Motif
Pfam: UCH UCH_1 TetR_C_13
Other DBs
NCBI-GeneID: 111236338
NCBI-ProteinID: XP_022620761
Position
Unknown
AA seq 1231 aa
MDTRKENKVRKQPMKPKSTTRKEKKYKTGRFIRRKSLRSFGNFMGRILKTLGTLAHFGDA
EPPDAEDDDGGFGQSASGGFKEDCSQIFREGTVKKSSTASSSHGSVKERLSWCYGDKTPG
VLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLEQYRSDVCHGRVNGEVRGEEPQSARGEV
TEQLASLVRALWTLEYQPQLSVEFKSIVAKYGSQFRGNSQHDALEFLLWLLDRVHEDASP
GPNNNSNSKTKANAKGPSPSEDPSSPSSASAQQPRGRHSFVQEHFQAQYRSSLTCPHCLK
QSNTFDPFLCISLPIPLRQTRPMCVTLVFNTKGQRYLRVGLAVPLFGTLSCLRAMVAEEG
NISPDQVILSELYSTGFQRSFSDDDDLTSISDSDVVYAFQAPPLYSRGGSAPHSGYHHSL
PSSPYTSTAGRDGQRLPPSGTLSSEYLNQGGSSKVLLLICNTAGSGQQAVRFGPPFLMRE
DRSISWDQLQQSILSKLYYLMLNGSQAQNAGVLFKIRVVGGSAAYSYLSPQDSRPLYHPA
VDRALKFCGPGGPPHVKLVIEWEHKTKECLFGSIQEEVVKDAESVRNQQQQHLQQHSCTL
DECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRNKL
STLVRFPLTGLDMAPHMVKRSQSMRNLNLGAWTPSWKQPSGQHNPPADMTLPIDYQYDLY
AVCNHHGGMHGGHYTAYCRNSVDGQWYSYDDSSVDLVPDEEVCTRGAYILFYQRRNTIPP
WSASSSIRGSTSSSMSDHWLIRLTGDSKRGSLVSRSSTTCPSSIPDSPESPVFLDNGSKE
ERGGFESRPFVRGLQGRSVSMRAPSKTKDTLSKVLPLRWSFGSKDRRKTEPVPAPVRDPA
PVELVQYLESGRRPRCTKDPIITLMSEPRSTKESAESRAAANVRSSSIGSISCVGKAGDE
PPPESPRVPEGQRRTSDKTASLRRSKGGQTRDESASNISSSSSSNTLTRRKDARKQSSSK
ASQDAETKRSFTAGVQPSYSTPSLHDETLRRQKVERADREHHGTYEGNSKTKKGEVPKNH
EGLLSFFKGNFLKKDKDLRKSKEGESGRGGGEEGGRRTLSRLSLSNGAVGGRTGVEGGKS
NGSGHLGDDVANGNVGRTAADIKRSQSSSNIPTKAEQSMRRTSSLHRNGMSTAPAPSRSL
TTDKPSYGTLQRTRYSTTSLGRKRTVPESSF
NT seq 3696 nt   +upstreamnt  +downstreamnt
atggatacccgcaaggaaaacaaggtaagaaaacaacccatgaaaccaaaatccacaacg
cgaaaggagaagaaatacaagaccgggaggtttatcaggaggaaatcgctgcgatctttt
gggaatttcatgggaaggatccttaaaactttgggcactttggcgcactttggcgacgcg
gaaccgccagacgcggaggacgacgacggcggcttcggccagagcgcttcggggggtttc
aaagaggactgctcgcagatcttcagggagggaaccgtgaagaagagctccacggcgtcc
tcctctcacggctcggtgaaagagaggctgtcgtggtgctacggtgacaagacccccggg
gtgctgggactgaagaaccacggcaacacctgtttcatgaacgccgtggttcagtgcctc
agcaacacggacctgctggccgagtacctcgggctggagcagtacaggtcggacgtgtgc
cacgggagggtgaacggggaggtgagaggagaggagccgcagagcgccaggggagaggtg
accgagcagctggcgtcgctggttcgagcgctgtggacactggagtaccagcctcagctg
tctgtggagttcaagagcatagtggccaaatacggctctcagtttcggggaaactctcag
catgatgccctcgagttcctcctctggcttctggacagagttcatgaagatgccagtcct
ggccccaacaataacagcaacagcaagaccaaagctaacgccaagggacccagtccatcg
gaggatccctccagtcccagttcagccagcgcacagcagcctcgaggtcgacacagtttt
gtccaggaacacttccaggctcagtacagatcttctctgacgtgccctcattgccttaag
cagagcaacaccttcgacccgtttttatgcatctccctgccaatccctctacgacaaacc
aggccgatgtgtgtgacgctggtgttcaatacgaagggtcagaggtatctgcgggtgggg
ctggctgtacctctctttggtaccctgtcctgccttagagccatggtggcagaggagggc
aacatctccccggaccaggtcatcctatcagagttgtactccacgggtttccagcgctcc
ttctcagatgacgacgacctgacgtcaatttctgacagcgacgtggtctacgccttccag
gctcctcccctctacagtcgcggaggctctgcaccgcactcagggtatcaccacagcctc
ccctcctctccctacacctccacggctggccgcgatggtcagaggttaccgccgtctggc
accctgtcctctgaatacctgaaccagggcggctcctcaaaggtcctcctcctcatctgt
aacacagcaggatctggccagcaggctgtcaggtttggacctccatttctcatgcgtgag
gacaggagcatctcctgggaccagctgcagcagagcatcctcagcaagctctattatctg
atgctgaatggatctcaggctcagaacgctggggtgctattcaagatcagagtggtggga
ggatcggcagcctacagctacctgtccccacaggatagcaggccactctaccaccctgca
gttgatagagcactgaagttctgtggtcctgggggacctccccatgtaaagctcgtcatc
gagtgggagcacaagactaaagaatgtctgtttggcagcatccaagaggaggtggtgaag
gatgcggagagtgtgaggaaccagcagcagcaacatctgcagcagcatagctgtaccttg
gacgagtgcttccagctgtacaccaaagaagaacagctcgccccagatgatgcctggaag
tgtccccactgtaaacagcttcagcagggcatggtgaagatgagcctgtggactctgcct
gacatactgatcctccatctcaagcgcttccgacaggtaggcgagcggaggaataagctg
tcaaccttggtgcgtttccccctgactggattggacatggccccccacatggtgaagagg
agtcagagtatgaggaacctgaacctgggagcctggacaccttcctggaagcagccctca
ggacaacacaacccacctgccgacatgaccctcccaatcgactatcagtacgacctctac
gctgtgtgtaaccatcacggaggaatgcatggaggacattatactgcttactgtaggaac
tcagtggacggccagtggtatagttacgatgacagcagcgtcgacctggtgccagacgag
gaagtttgtaccagaggagcttacatccttttctaccagagacgcaacactattcctcca
tggtcggccagtagctccatcagaggctccacgagttcatccatgtcagaccactggctg
atccggctgacaggggacagtaagagaggcagtctagtgtctcgatcctccaccacctgc
ccgtcttccatacccgactctccggagtctccggtcttccttgacaatggttccaaagag
gagagggggggttttgagagcaggccatttgtcaggggtcttcaggggcgcagtgtgagc
atgagagcccccagcaagaccaaagacactctgagcaaagtgcttcccctgcgctggtcc
tttggttccaaggatagacgaaaaacagagccagtgcctgcaccggtcagagatcctgcc
cctgtagagctagtgcagtacttggaatctggtcggcggccccggtgcacaaaggaccca
ataataacgttgatgagcgaaccgcgcagcacaaaggaatctgctgagagccgcgccgcc
gccaatgtccgatcatccagcattgggagtataagttgtgtgggtaaagcaggggatgag
ccgcctccagaatctccacgggtcccagagggccagaggagaacatcagataagacagcc
agcttgaggcgcagcaagggaggccagacaagagatgagagtgcctcgaatatcagcagt
agctctagcagtaacacccttaccaggaggaaggatgccaggaagcagagctcctccaaa
gcttcccaggacgctgagacaaaaaggagtttcactgctggagttcagcccagctacagt
acacccagccttcatgatgagactctgagaaggcaaaaggtagaaagggctgatagggag
catcatggtacatatgaaggaaactcaaaaaccaagaagggagaagtacccaagaaccac
gagggactgctctccttcttcaaaggtaactttctaaagaaggataaggacctgaggaag
tccaaggagggtgagtcagggagaggaggaggtgaggaaggaggcagaaggaccttgtcg
aggctgtcactgtctaacggagcagtcggaggcagaactggggtggaaggaggcaagtct
aacggctcaggccatctgggtgatgacgtggccaatggaaatgtggggcgcacggcggct
gacatcaagcgctcgcagagttcctccaacatccccaccaaggcagagcagagcatgcgc
agaacatcgtctttgcatcgtaatggcatgtccacagccccggcaccgtcacgcagcctg
acaacagacaaaccatcttacggcaccctgcagaggactcgttacagcacaacctccctg
gggcgcaaaaggacagtcccagagtcgagcttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system