KEGG   Seriola dumerili (greater amberjack): 111238044
Entry
111238044         CDS       T05606                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
  KO
K13178  ATP-dependent RNA helicase DDX17 [EC:5.6.2.7]
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sdu03041]
    111238044
Enzymes [BR:sdu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     111238044
Spliceosome [BR:sdu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    111238044
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_C_2
Other DBs
NCBI-GeneID: 111238044
NCBI-ProteinID: XP_022623146
Position
Unknown
AA seq 649 aa
MRGSYGDRDRDRARDRGSPRFGSSRGGPPSGKKFGNPGDRLRKKRWDLDELPKFEKNFYS
EHIEVQRMSQYDLEEYRRKKEITVRGSGCPKPVTTFHQAQFPQYVMDVLMHQNFKEPTAI
QAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTRELA
QQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR
RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVQI
NVGALELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRR
MRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVDTGRG
GGGGGGGRPRFRGGSNSNNPNLMYQDECDRRMRSVGGSGSSKDSRSSSSYSRDSRDSRGG
SSRDGDRTSSSSSYRDRSSRDGGRSYSSSSSSYDQYQNNSGGGGSSQYGSSRGTSGSAGG
GAGQAPPPSSVPQPLMAQQFNPPQPMMGLMGHSPFQFAPPPPPPSSGRK
NT seq 1950 nt   +upstreamnt  +downstreamnt
atgagaggttcgtacggagacagagatagagaccgtgcccgtgacagaggcagccctcgt
ttcgggtccagcagaggtggaccaccgtcgggtaagaagtttgggaaccccggggaccgt
ttacgaaagaagaggtgggacctggacgagcttcccaaatttgagaagaacttctacagt
gaacacattgaagtgcagagaatgagccagtatgatcttgaggagtatcgcaggaagaaa
gaaatcactgttcgaggctcaggctgcccaaagcctgtcaccaccttccatcaggcacag
tttccccaatatgtaatggatgtactgatgcatcagaacttcaaggagcccacagccatt
caggctcaaggtttccccctggctctcagcgggagagacatggtgggcattgctcagact
ggctctgggaagacattatcgtatctcctgcctgcaattgtgcacatcaaccatcagccc
tacctggagcgtggagacggacccatttgcttggttctggcccccacaagagaactggcg
cagcaggtccagcaggtggcatatgactatgggaagtcatcccgcatcaaaagcacttgt
gtgtatggaggtgctcccaagggacctcaaatccgagacttggagagaggcgttgagatc
tgcattgccacgccaggtcgtttgattgacttccttgaggctggaaagaccaacctgcgg
cgctgcacatacttagttctagatgaagcagaccgtatgctggacatgggttttgaacca
cagattcgcaaaattgtggaccagatcaggcctgacagacagaccctgatgtggagcgct
acgtggcctaaagaggttcgccagctggcagaggacttcctgaaggactatgtccaaatc
aatgttggagcactggaactcagtgccaaccacaacatccttcagatagttgatgtctgt
atggagagtgagaaggaccacaagttgatccagctgatggaggagattatggctgagaaa
gagaacaagaccatcatctttgtggagaccaagaaacgatgtgacgacctcacacgcaga
atgagacgtgatgggtggcctgccatgtgtatccatggtgataagagccagccagagaga
gactgggtgttgtcagagttccgcagcggcaaagctcccatcctcatcgctactgacgtg
gcctcacgcggtttggatgtggaggatgtcaagtttgtcatcaattatgattatcccaat
tcatcggaggactacatccaccgcatcggccgtacggcccgcagcaccaacaaaggcacc
gcctacaccttcttcaccccggggaacctccgccaggcccgggagctgatccgggttctg
gaggaggcccgacaggccatcaaccccaaactgctgcagctggttgacactggacgtgga
ggaggaggcggaggaggtggccgcccccgcttccgtggtggctccaattctaacaacccc
aacctgatgtaccaggacgagtgtgatcgccggatgcgttctgtgggtgggagcggcagc
tccaaggacagccgcagcagcagtagctacagtcgggacagcagagacagccgcggtggg
agcagccgggacggggaccgcacctcctcttcctcctcatacagagatcgcagcagcagg
gacggaggacgcagctacagctccagctccagctcgtatgaccagtaccagaataacagc
ggcggcggcggcagcagccagtacggcagctccaggggcacatctgggtcagcgggcggt
ggagcggggcaggccccgcctccatcgtcggttccccagcctctgatggcccagcagttc
aaccctccccagcccatgatgggcctgatggggcactcccctttccagtttgctcctcca
ccaccgcctccttcctcagggagaaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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