KEGG   Seriola dumerili (greater amberjack): 111240453
Entry
111240453         CDS       T05606                                 
Symbol
ncbp2
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu03013  Nucleocytoplasmic transport
sdu03015  mRNA surveillance pathway
sdu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111240453 (ncbp2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    111240453 (ncbp2)
   03015 mRNA surveillance pathway
    111240453 (ncbp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdu03019]
    111240453 (ncbp2)
   03041 Spliceosome [BR:sdu03041]
    111240453 (ncbp2)
Messenger RNA biogenesis [BR:sdu03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     111240453 (ncbp2)
Spliceosome [BR:sdu03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    111240453 (ncbp2)
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 111240453
NCBI-ProteinID: XP_022626198
Position
Unknown
AA seq 164 aa
MSVKLNALNSDSYIDISQYRDQHFKGNRYEQEKLLKQSHTLYVGNLSFYTTEEQVHELFS
KSGDVKRIIIGLDKVKKTACGFCFVEYYMRAGAEHAMRFINGTRLDDRIIRTDWDAGFKE
GRQYGRGKSGGQVRDEYRQDYDPARGGYGKLAQQHPPAETRNTF
NT seq 495 nt   +upstreamnt  +downstreamnt
atgtctgttaaattaaacgctttgaatagtgattcttacattgatattagccaatacaga
gaccagcattttaagggtaaccgctatgaacaggagaagttgctaaagcagagccacact
ctgtatgtggggaacctctccttctacaccacagaagagcaggtgcatgagctgttttcc
aaaagtggagacgtcaagcgcatcatcatcggcctagataaagtcaagaagacagcctgc
ggattctgctttgtagaatactacatgcgtgcaggcgcagaacatgccatgcgcttcatt
aatggcacacggctggacgatcgtatcatcaggacagactgggacgccggcttcaaggag
ggacgacagtacggccgcggcaaatctggaggacaggtgagagatgagtacaggcaggac
tacgacccagccagaggcggctatggtaaactggctcagcagcatccacccgcagagaca
cgtaatacattttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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