KEGG   Shigella dysenteriae Sd197: SDY_3093
Entry
SDY_3093          CDS       T00306                                 
Symbol
gspD
Name
(GenBank) putative type II secretion protein
  KO
K02453  general secretion pathway protein D
Organism
sdy  Shigella dysenteriae Sd197
Pathway
sdy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sdy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SDY_3093 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sdy02044]
    SDY_3093 (gspD)
Secretion system [BR:sdy02044]
 Type II secretion system
  General secretion pathway protein
   SDY_3093 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 LUD_dom NIBRIN_BRCT_II
Other DBs
NCBI-ProteinID: ABB63109
ShiBASE_China: SDY3093
UniProt: Q32C46
Position
2869065..2870900
AA seq 611 aa
MGPGVQGKVSIRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVKSSAAKVEPLPL
VGEGSDNYAGDEMVTKVVPVRELAPILRQMIDSAGSGNVVNYDPSNVIMLTGRASVVERL
TEVIQRVDHAGNRTEEVIPLDNASASEIARVLESLTKNSGENQPATLKSQIVADERTNSV
IVSGDPATRNKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDVLKQVSGTLTAAKEEA
EGTVGSGREVVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRRAQVHVEALIVEVAEG
SNINFGVQWASKDAGLMQFANGTQIPIGTLGAAISQAKPQKGSTVISENGATTINPDTNG
DLSTLAQLLSGFSGTAVGVVKGDWMALVQAVKNDSSSNVLSTPSITTLDNQEAFFMVGQD
VPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSKVEGQTSLDV
VFGERKLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPLIGNLFKSTADKKEKRN
LMVFIRPTILRDGMAADGVSQRKYNYMRAEQIYRDEQGLSLMPHTAQPVLPAQNQALPPE
VRAFLNAGRTR
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggggccgggcgtacaggggaaagtgagtattcgcaccatgaccccgctcaatgaacgc
cagtattaccagctattccttaacctgctggaagcacaggggtatgccgtcgtaccgatg
gaaaacgacgtgctgaaggtggtgaaatccagcgctgcgaaagtcgagccgctgccgctg
gtcggtgaaggcagcgacaactacgcgggcgatgaaatggtcaccaaagtagtgccggta
cgcgagctggcaccgattctgcgccagatgatcgacagcgcaggctcaggcaacgttgtt
aattacgatccctccaacgtgattatgctcaccggacgcgcctccgttgtggagcgcctg
acggaagtgatccagcgcgtggatcacgcgggtaatcgcaccgaagaggtgatcccgctg
gataacgcctcggcttcggaaatcgcccgcgtgctggaaagcctgacgaaaaacagcggc
gagaaccagcctgcgacgctgaaatctcaaattgtcgccgacgaacgcaccaacagtgtg
attgtcagtggtgacccggccacgcggaacaaaatgcgccgcctgatccgtcgcctggac
tcagaaatggagcgcagcggcaacagccaggtgttctatctcaaatacagcaaagccgaa
gatctggtcgatgtactgaagcaggtcagcggcacgctcacggcggctaaagaagaggcg
gaaggcacggtcggtagcgggcgtgaggttgtctccatcgcagccagcaaacacagtaat
gccctgattgtaaccgcgccgcaggacatcatgcagtcgctgcaaagcgtgattgaacaa
ctggatattcgccgtgctcaggtgcacgtcgaggcgttgatcgtggaagtggccgaaggc
agtaatatcaacttcggcgtgcagtgggcgtcgaaagatgccggattaatgcagtttgct
aatggtacgcagatccctatcggtacgctgggggcagccatttctcaggcgaaaccgcag
aaaggctcgacggtgatcagtgaaaacggcgctaccaccattaatccggataccaacggc
gatctctccacgctcgcccagcttctttccggctttagcggtacggcggttggcgtggtg
aaaggcgactggatggcgctggtacaggcggttaaaaacgactccagctcgaacgttctc
tccacgccgagcatcaccacgctggacaaccaggaagccttcttcatggtgggtcaggac
gttccggtattaaccggctctaccgttggctccaataacagtaatcctttcaatacagta
gaaaggaaaaaagtcggcatcatgctgaaagtcacgccgcagattaacgaaggtaacgcg
gtacagatggtgattgagcaggaagtctcgaaggtggaaggacagaccagcctcgacgta
gtgtttggtgagcgcaaactgaaaaccaccgtgctggctaacgatggtgaactgattgtg
cttggtggtctgatggacgaccaggcgggagaaagtgtggcgaaagtgccgctgcttggc
gatatcccattgattggtaacctgtttaaatcgacggcggataaaaaagaaaaacgtaac
ctgatggtgtttatccgtccgaccattctgcgtgacggtatggcggcagacggcgtgtcg
cagcgcaaatataactatatgcgcgccgaacagatctatcgcgatgagcaaggcttaagc
ctgatgccgcacaccgcgcagccggtactgccagcgcaaaaccaggccttaccgccggaa
gtacgtgcgttccttaatgccgggagaacgcgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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