KEGG   Shigella dysenteriae Sd197: SDY_4183
Entry
SDY_4183          CDS       T00306                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta-subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
sdy  Shigella dysenteriae Sd197
Pathway
sdy03030  DNA replication
sdy03430  Mismatch repair
sdy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sdy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SDY_4183 (dnaN)
   03430 Mismatch repair
    SDY_4183 (dnaN)
   03440 Homologous recombination
    SDY_4183 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sdy03032]
    SDY_4183 (dnaN)
   03400 DNA repair and recombination proteins [BR:sdy03400]
    SDY_4183 (dnaN)
Enzymes [BR:sdy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SDY_4183 (dnaN)
DNA replication proteins [BR:sdy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SDY_4183 (dnaN)
DNA repair and recombination proteins [BR:sdy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SDY_4183 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: ABB64088
ShiBASE_China: SDY4183
UniProt: Q329B7
Position
complement(3917100..3918200)
AA seq 366 aa
MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV
QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLD
DWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC
SMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGR
FPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQE
EAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYV
VMPMRL
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgaaatttaccgtagaacgtgagcatttattaaaaccgctacaacaggtgagcggtccg
ttaggtggtcgtcctacgctaccgattctcggtaatctgctgttacaggttgctgacggt
acgttgtcgctgaccggtactgatctcgagatggaaatggtggcacgcgttgcgctggtt
cagccacacgagccaggggcgacgaccgttccggcgcgcaaattctttgatatctgccgt
ggtctgcctgaaggcgcggaaattgccgtgcagctggaaggtgagcggatgctggtgcgc
tccgggcgtagccgtttttcgctgtctaccctgccagcggcggatttcccgaacctcgat
gactggcagagtgaagtcgaatttaccctgccgcaggcgacgatgaagcgtctgattgaa
gcgacccagttttctatggcgcatcaggacgttcgctattacttaaacggtatgctgttt
gaaaccgaaggtgaagaactgcgcaccgtggcgaccgacggccaccgtctggcggtctgt
tcaatgccaattggtcaatctttgccaagccattcggtgatcgtgccgcgtaaaggcgtg
attgaactgatgcgtatgctcgacggcggcgataatccgctgcgtgtgcagattggcagc
aacaatattcgcgcccacgttggcgactttatcttcacctctaaattggtggatggtcgc
ttcccggattaccgccgcgttctgccgaagaatccggacaaacatctggaagcaggctgc
gatctcctcaagcaggcgtttgctcgcgcggcaattctctctaacgagaaattccgcggt
gtgcgcctgtatgtcagcgaaaaccagctgaaaatcaccgccaacaacccggaacaggaa
gaagcggaagagatcctcgacgttacctatagcggtgcggagatggaaatcggcttcaac
gtcagctatgtgctggatgttctgaacgcgctgaaatgcgaaaacgtccgcatgatgctg
accgattcggtttccagcgtgcagattgaagatgccgcatcacagtcggctgcctatgtt
gtcatgccaatgagactgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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