KEGG   Shigella dysenteriae Sd197: SDY_P122
Entry
SDY_P122          CDS       T00306                                 
Name
(GenBank) oriT nicking and unwinding protein, fragment
Organism
sdy  Shigella dysenteriae Sd197
SSDB
Motif
Pfam: AAA_30 TrwC TraI_2B ssDNA_TraI_N AAA_19 TraI_C AAA_11 HPTransfase UvrD_C_2
Other DBs
NCBI-ProteinID: ABB64635
ShiBASE_China: SDYP122
UniProt: Q326X3
Position
pSD1_197:96517..100710
AA seq 1397 aa
MALFNHDTSRDQEPQLHTHAVVANVTQHNGGWKTLSSDKVGKTGFIENVYANQIAFGRLY
REKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLKSRDVAALD
TRKSKQHVDPEVRMAEWMQTLKETGFDIRAYRDAADQRAEIRTQAPGPASQDGPDVQQAV
AQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLF
TSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQG
GAAGQRERVAELVMMAREQGREVQIIAADRRSQMNLKQDERLSGELITGRRQLLEGMAFT
PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRW
QGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAIRSELKTQGVLG
HPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVTERVTAQSHSLTLRN
AQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAM
TVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATPNGL
ARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKARAGETLLETAISLQKAGLHTPAQ
QAIHLALPVLESKNLAFSMVDLLTEAKSFAAEGTGFADLGGEINAQIKRGDLLYVDVAKG
YGTGLLVSRASYEAEKSILRHILEGKEAVTPLMERVPGELMEKLTSGQRAATRMILETSD
RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLAS
FLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA
IAPGQPFRLQQTRSAADVVIMKEIVRQTPELREAVYSLINRDVERALSGLERVKPSQVPR
LEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEARE
QTLIVTHLNEDRRVLNSMIHDAREKAGELGQVQVMVPVLNTANIRDGELRRLSTWENNPD
ALALVDNVYHRIAGISKDDGLITQQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRI
RFTKSDRERGYVANSVWTVIAVSGDSVTLSDGQQTCVIRPGQERAEQHIDLAYAITAHGA
QGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGT
AHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGWPGETVLHGLLLRDVNIRNR
MWHCRRLTVTASPPVSG
NT seq 4194 nt   +upstreamnt  +downstreamnt
atggcgctttttaatcacgacaccagtcgcgatcaggaaccacagttacacacgcatgcg
gtggtggctaatgtcacgcagcataacggcgggtggaagacactgagcagtgacaaagtg
gggaaaacggggttcattgagaatgtgtacgctaatcagattgcctttggcaggctctac
cgggaaaagctgaaagagcaggttgaggcgctgggctatgaaacggaagtggttggtaag
cacggtatgtgggaaatgccgggcgtaccggtggaggccttttccggacgctcacagact
atccgggaggccgtcggggaagacgcctcgctgaaatcccgggatgtggcggcactggat
acgcgaaaatccaaacagcacgtcgatcctgaagtcagaatggctgaatggatgcagacg
ctgaaggaaaccgggttcgacatccgggcatatcgtgacgcggcggatcagcgtgcggag
atccgcacgcaggcgcccgggcctgcttcacaggacgggccggatgtgcagcaggcggtg
gcacaggccattgccggattaagtgaacgaaaagtgcagttcacgtacacggacgtgctg
gccagaacggtcggcatactgccgccggaaaatggtgtgattgaacgggcacgcgccggt
atcgatgaggccatcagccgtgagcagctcatcccccttgaccgtgaaaaggggctgttc
acgtccgggattcatgtgctcgatgagctgtcagtccgggcactcagtcgtgacatcatg
aaacagaaccgggtgaccgtacatccggagaaaagtgtcccccggacggccggttacagc
gatgccgtcagtgttctggcacaggatcgcccgtcgctggccattgtgtccgggcagggc
ggtgcagccgggcagcgtgagcgggtggctgaactggtcatgatggcccgggagcagggg
cgggaagtgcagattatcgctgctgaccgtcgctcgcagatgaatctgaagcaggatgaa
cggctgtccggtgaactgataaccggacgtcgtcagttgctggaaggcatggccttcacg
ccgggcagtaccgttatcgtcgaccagggcgaaaaactctccctgaaagagacgttaacc
ctgctggatggtgccgcacgtcataacgtacaggtcctgataaccgacagcgggcagcga
accggtacaggcagtgcactgatggccatgaaggatgccggggtgaacacatatcgctgg
caggggggagaacagcgaccggccaccatcatcagtgaaccggaccgtaatgtccgctat
gcccgactggccggagattttgcggccagcgtgaaagccggagaagagagcgtggcacag
gtcagcggagtacgggaacaggccattcgcagtgagctgaaaacacagggcgtgctcgga
cacccggaggtaaccatgaccgccctgtcaccggtctggctggacagccggagccgttat
ctgcgggatatgtaccgcccgggaatggtgatggagcagtggaacccggagacacgcagt
catgaccgctatgtgacagaacgtgtgacggcgcagagtcacagcctgaccctgcggaat
gcgcagggcgaaacgcaggtggtgcgtatttcttccctggacagcagctggtcgctgttc
cggccggaaaaaatgccggtggcagacggtgagcgtctgagggtgacagggaaaattccc
ggactccgcgtctccggcggtgaccgcctgcaggtggcatccgtcagtgaagatgcgatg
acggttgttgtgccgggacgggctgaaccggccaccctgcctgtgagcgattcaccgttc
acggcactgaagctggagaacggctgggtggaaacgcccgggcattccgtcagcgacagt
gcgacggtttttgcctccgtcacacagatggcaatggacaatgccaccccgaacggtctg
gcccgcagtggtcgtgatgtccggctgtattcctcactggatgaaacccgtactgcggaa
aaacttgcccgccatccctcctttacggtggtttctgagcagataaaggcgcgtgccggt
gagacattactggaaaccgctatcagtttgcagaaagccgggcttcacacgccggcacag
caggccattcatctggcccttcctgtgctggaaagtaaaaacctggccttcagcatggtg
gacctgctgacagaggcgaagtcgtttgctgcagaaggaaccggttttgctgacctggga
ggggaaatcaatgcgcagataaaacggggtgatttactgtatgtggatgtggcaaaaggc
tatggcacaggcctgctggtttcccgtgcgtcgtatgaggcagaaaagagcattcttcgc
catattctcgaaggtaaggaggcggtcacgccgctgatggagagagtacctggcgaactc
atggagaaactgacatcaggacagcgcgccgccacccgtatgatactggaaacgtccgac
cgtttcacggtggtgcagggctatgccggtgtgggtaagaccacacagttccgggcggtg
atgtcagccgtgaacatgctgccggagagtgaacgtccccgtgtcgtggggctggggcct
acacaccgtgcggtcggggagatgcgcagcgccggcgtggatgcacagacactggcgtcc
tttctgcatgacacgcagctgcagcagcgcagcggagaaacgccggatttcagcaacacg
ctgttcctgctcgatgagagctctatggtgggcaataccgacatggcacgggcatacgcc
ctgattgcggccggtggcggtcgggctgtggccagcggtgacacggaccagctgcaggcc
atcgcgcccggtcagcctttccgtctccagcagacgcgcagtgctgccgatgtggtcatc
atgaaggagattgtgcgtcagacgccggaactgcgggaggcggtatacagcctgattaac
cgggatgtggaaagggcgctgtccgggcttgagcgtgtgaaaccgtctcaggtgccacgt
ctggagggcgcatgggcaccggagcactccgtgacggagttcagtcacagccaggaagcg
aaactggcagaagcgcagcagaaggcgatgctgaaaggcgaggcttttccggatgtcccc
atgacactgtatgaagccattgtccgcgactataccggcaggacaccggaagcacgggag
cagacgctgattgtcacgcacctgaatgaggaccggcgcgtactgaacagcatgattcat
gatgcacgggaaaaggccggagaactggggcaggtgcaggtcatggtgcctgtcctgaac
acagcgaatatacgcgacggggagctgcgtcgtctctccacctgggagaataacccggat
gcccttgccctggtggataatgtgtatcaccggattgccggtatcagcaaggatgacggg
ctgataacccagcaggatgcggaaggtaacacgcggctgatttcgccccgggaggcggtg
gctgaaggcgtcacgctgtacaccccggacaccatccgggtggggaccggtgacaggata
cgcttcacgaagagtgaccgggagcgcggttatgtggccaacagcgtctggacggtgata
gcggtttccggtgacagtgtcacactttctgacggtcagcagacctgtgtgattcgcccc
ggtcaggagcgggcagagcaacatattgacctggcctatgccatcaccgcacacggtgca
cagggggcgagtgaaacctttgccatcgcgcttgaaggcacggaaggtaaccggaaactg
atggccggctttgagtcagcctacgtggccctgtcgcgtatgaagcagcatgtgcaggtg
tacaccgataaccgtcagggctggacggatgccatcaacaatgccgtacagaaaggaact
gcccacgatgtgtttgagccgaaaccggaccgggaagtcatgaatgcagagcggctgttc
agtacggcgcgggagctgcgggacgtggcggcaggccgtgccgttctccgtcaggcgggc
tggccgggggagacagtcctgcacggtttattgctccgggacgtaaatatccgcaaccgt
atgtggcactgccggcgtttgaccgtaacggcaagtccgccggtatctggctga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (14)   

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