KEGG   Shigella dysenteriae 1617 (serotype 1): Asd1617_03950
Entry
Asd1617_03950     CDS       T02933                                 
Name
(GenBank) TRNA pseudouridine(13) synthase
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
sdz  Shigella dysenteriae 1617 (serotype 1)
Brite
KEGG Orthology (KO) [BR:sdz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sdz03016]
    Asd1617_03950
Enzymes [BR:sdz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     Asd1617_03950
Transfer RNA biogenesis [BR:sdz03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Asd1617_03950
 Prokaryotic type
    Asd1617_03950
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AHA66777
UniProt: A0A0A6ZXV5
Position
complement(2676154..2677122)
AA seq 322 aa
MVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQ
WLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQR
LIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIV
AERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGT
QREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAG
SFATSVVRELINTTGDYAHIAE
NT seq 969 nt   +upstreamnt  +downstreamnt
gtggtggtggaagatttgggctttgagcctgatggtgaaggtgagcatattctggttaga
atcctcaaaaacggctgcaatacccgatttgtggcggatgcactggcgaaattcctgaaa
attcatgcccgtgaagtcagcttcgctgggcaaaaagataaacatgctgttacggaacag
tggttatgcgctcgcgtgccgggcaaagagatgcccgatctgagtgcctttcaactggaa
ggctgccaggtgctggagtatgcgcggcacaagcgcaagctgcgtttaggggcgctgaaa
ggtaacgcctttaccctggtactacgcgaagtgagcaatcgcgatgacgttgaacaacgt
ctgatcgatatttgcgtaaaaggtgtaccgaactacttcggtgcccaacgttttgggatt
ggcggtagcaacttgcagggcgcgctgcgctgggcgcaaaccaatactccggtgcgcgat
cgcaataaacggagtttttggttgtcggcagcccgcagtgcgttgtttaatcagattgtt
gctgagcgcctcaaaaaagcagacgttaatcaagttgttgacggcgatgcgctacaatta
gccggacgtggtagctggtttgtagcaaccaccgaagaactggcggaattacagcgtcgc
gtcaacgataaagagctgatgataaccgccgcattgccgggcagtggcgaatggggaact
cagcgtgaagcgctggcattcgaacaagcagctgtcgccgcagaaactgaattacaagct
ttactggtgcgcgaaaaagttgaagccgcgcgcagagcgatgctgctgtatccgcaacaa
ttaagctggaattggtgggatgacgtcaccgtagagatccgtttctggcttccggcgggt
agttttgcaaccagcgttgtcagggaacttatcaacacaacaggtgattatgcgcatatt
gctgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system