KEGG   Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_2722
Entry
SCH_2722          CDS       T00240                                 
Symbol
ygaF
Name
(GenBank) paral putative sarcosine oxidase-like protein
  KO
K15736  (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
Organism
sec  Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec00310  Lysine degradation
sec01100  Metabolic pathways
sec01120  Microbial metabolism in diverse environments
Module
sec_M00956  Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:sec00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    SCH_2722 (ygaF)
Enzymes [BR:sec01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.5  With a quinone or similar compound as acceptor
    1.1.5.13  (S)-2-hydroxyglutarate dehydrogenase
     SCH_2722 (ygaF)
SSDB
Motif
Pfam: DAO Mqo Pyr_redox_2 NAD_binding_9 NAD_binding_8 FAD_binding_2 Thi4 Amino_oxidase
Other DBs
NCBI-ProteinID: AAX66628
UniProt: Q57KY4
Position
2893527..2894795
AA seq 422 aa
MYDFVIIGGGIIGMSTAMQLIDLYPDARIALLEKESAPACHQTGHNSGVIHAGVYYTPGS
LKARFCLAGNQATKTFCDQNNIRYDTCGKMLVATSELEMARMRALWERTAANGLEREWLS
AAELREREPNIIGLGGIFVPSSGIVSYRDVATAMANRFQAKGGEIIYHAEVSALTEHAAG
VVIRTSQGREIETATLIGCAGLMADRLVKMLGVEPGFIICPFRGEYFRLAPRHNRIVNHL
IYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLALKREGYRKRDVSFTDTLEIFRSAGIRR
VLQNHLLSGLGEMKNSLCKSGYLRRVQKYCPSLTVNDLQPWPAGVRAQAVSPDGKLIDDF
LFVTTPRSIHTCNAPSPAATSAIPIGAHIVSKVQALRASQSNPGRTLRAARSVDALHAAF
TR
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtatgattttgtgattatcggcggcggcattatcggcatgtcgaccgccatgcaactt
attgatctctatccggatgcgcgcatcgcgttgctggaaaaagagtccgcgccagcctgc
caccagaccgggcataacagcggcgtgatccatgccggggtgtactacacgcccggcagc
ctcaaagcgcggttttgtctggcgggcaatcaggcgaccaaaaccttttgcgatcaaaac
aacatccgctacgacacctgcggcaaaatgttggtcgccacctcggagctggaaatggcg
cggatgcgcgcgctatgggagcggacggcggccaacggcttagagcgcgagtggttaagc
gcggcggagctgcgtgaacgcgaacccaatatcattggcctgggcgggatttttgtccct
tccagcgggattgtcagctatcgcgatgtcgcgacggccatggcgaaccgctttcaggcc
aaaggcggcgagatcatctaccatgccgaggtcagcgcgctaacagaacatgccgctggc
gttgtcattcgcacctcgcaaggtcgggaaatcgaaaccgctacgcttatcggctgtgca
gggctgatggcggatcggctggtcaaaatgctgggcgtggagcccggttttattatctgc
cctttccgcggcgagtactttcgtctggccccgcggcacaaccggatcgttaaccatttg
atctacccgatccccgatccggcaatgccgtttctcggcgtccatcttacccgcatgatc
gacggcagtgtcacggtcgggccgaatgcggtgctggcgcttaaacgcgaaggctaccgt
aagcgcgacgtttccttcaccgacaccctggagattttccgctccgccggcattcgccgc
gtactgcaaaaccatctgctttccggactgggcgagatgaaaaactcgctgtgcaaaagc
ggctatttgcggcgagtacaaaagtattgccccagcctgaccgtcaacgatctccagccc
tggccggcaggcgtgcgggcgcaggcggtttcaccggacggcaaactgattgatgatttt
ctgtttgtcacgacgccgcgttccattcacacctgtaacgccccctccccggcggcgaca
tcagcgatacctatcggcgcgcatatcgtcagtaaagttcaggcgctacgcgcaagccag
agcaaccccggacgtacgctgcgtgcggcacgcagcgtggacgcactacacgccgcattt
acccgttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (3)   
   KEGG MODULE (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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