KEGG   Secondary endosymbiont of Ctenarytaina eucalypti: A359_01430
Entry
A359_01430        CDS       T02199                                 
Name
(GenBank) ATP-dependent DNA helicase UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
sect  Secondary endosymbiont of Ctenarytaina eucalypti
Pathway
sect03420  Nucleotide excision repair
sect03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sect00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A359_01430
   03430 Mismatch repair
    A359_01430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sect03400]
    A359_01430
Enzymes [BR:sect01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A359_01430
DNA repair and recombination proteins [BR:sect03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A359_01430
   MMR (mismatch excision repair)
    Other MMR factors
     A359_01430
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_22 SpoIIAA-like
Other DBs
NCBI-ProteinID: AFP84546
UniProt: J3VRG4
Position
227997..230150
AA seq 717 aa
MDVCDFLNILNEKQREAVTAPRGNLLVLAGAGSGKTRVLVHRIAWLLLVKHHSPHSVMGV
TFTNKAATEMRYRIEHLLGTNQNGMWIGTFHGLAHRLLRAHYQEVNLPSDFQILDSEDQL
RLLKRLIRTMQLSEKQWTPRQAMRYIGGKKNNGVRPQHVESYRYPAEATWQRIYQTYQDA
CDRSGLVDFSELLLRACELWMNKPHILRHYHERFTNILVDEFQDTNPMQYAWIRMLSSNV
MIVGDDDQSIYGWRGAQVENIQRFLDDFPESKIIRLEQNYRSTNNILQAANALIAHNGIR
LGKKLWTKSVEGEPITLYCAFNEVEEARFVVNRIKVEKEYGRSLNDCAILYRSNAQSRVV
EDALLQAGVPYRIYGGMRFFERQEIKDALAYLRLMTNRNDDAAYERVVNTPSRHLGDRAL
AVVRQIASTRQLTLWQSSRALLAERLLSGRSAAALRRFLELVDVLEEETADLPLCLQTDQ
VIKKSGLWNMYAHEEGEKGQGRIENLEELVNAARQFNDHDADQDISPLQRFLAHTALESG
EDHHIAYQDAVQLMTLHASKGLEFSYVFIIGMEEGIFPSQRSLSEDGRLEEERRLAYVGI
TRAMKKLTITYAERRRLYGKEAHHRPSRFVSELPKACVEEVCLRARVTGPVSQQPLAVHL
RGNDGGFPLGQRVRHPKFGEGTILNAEGRGAHRRLQIAFSSYGIKWLVLAYARLETF
NT seq 2154 nt   +upstreamnt  +downstreamnt
atggacgtttgtgattttctcaacatcttaaacgaaaaacaacgggaagccgtaacggcg
ccgcgaggtaatttactcgtgctagcaggggcgggtagtggtaaaacccgggtcctagtg
caccgcattgcctggttgctattagttaaacaccactctccccattcggtaatgggagtg
accttcaccaataaagcagcgacggaaatgcgctaccgtatcgaacatctccttggaacc
aaccaaaacggaatgtggataggcaccttccatgggttagcccaccgtctactgcgtgca
cattatcaagaggttaacctgccttcagattttcaaatccttgacagcgaggaccagctg
cgtttgttaaagcgtctcatccgtacgatgcagcttagtgagaagcagtggactccgcgt
caagcgatgcggtatatcggtgggaaaaaaaataatggcgtgcgcccacagcatgtggaa
agttatcgctatccagcggaggcgacctggcaacgtatttatcaaacctatcaggacgct
tgtgaccgctctgggttggttgatttttctgagcttcttctccgcgcttgtgaactttgg
atgaacaagccgcatattctacgccattaccacgagcggtttaccaatattctggtggat
gaatttcaggatacgaacccaatgcaatatgcctggatacgcatgctatctagtaatgtt
atgatcgtgggtgatgatgaccaatcgatttacggctggcgcggtgctcaggtggaaaat
atccagcgttttctagatgattttcccgagtcgaagatcattcgtctagagcaaaattac
cgttccactaacaatatcctgcaggccgctaatgccctaatcgcgcacaacggcatccgg
ttaggcaaaaagctatggaccaaaagcgtagaaggggagccaattactctttactgcgcc
tttaatgaagtggaggaggcccgttttgtcgtaaaccgtattaaagtagaaaaagagtat
ggcaggagcctcaatgactgcgctattctctatcgtagcaacgcccagtcacgtgtagtg
gaagatgctctcttgcaagcgggagtgccttatcgtatttatggcggcatgcgctttttt
gagcggcaggaaatcaaggatgcgctcgcttatttacgactcatgactaaccgaaatgac
gacgcagcatatgaacgggtggttaatacgccttcacgtcaccttggtgatcgggccctc
gcggtggtgcgtcagatcgcttctaccaggcagctgacgctttggcagtccagccgggcg
ctgcttgccgaacggctgttgtctggaagatctgccgccgcactacggcggtttttagag
cttgtagatgtgctggaggaagagaccgcggaccttccgctatgcctgcaaactgatcag
gtgataaaaaagtccggtctttggaatatgtacgcacatgaagagggcgaaaaaggtcag
gggcgcattgaaaatctggaagagcttgtcaacgccgcccgtcaatttaacgaccatgat
gcagatcaggatatatcaccattgcagaggttccttgctcacacagctctggagtctggc
gaggaccatcacattgcctatcaggacgcagttcaattaatgacgctacatgcttccaaa
gggctagagttttcctacgtattcattatcgggatggaagaaggcatttttcctagccaa
agatcgttatctgaagacggacgcctagaagaagaacgccgcttggcgtacgttggcatt
acccgagcaatgaaaaagctgactattacttatgcagagagacgaaggttgtacggaaaa
gaagcccaccataggccgtcgcgttttgtcagtgaactaccgaaagcctgcgtggaagaa
gtgtgtcttcgcgcaagagtaaccgggccggttagccaacagcctctagctgtgcatctg
agggggaatgatggcggtttccctcttggtcagcgagtgcgtcatccaaaattcggtgaa
ggtactattttaaatgcagaaggtagaggcgcgcatagacggcttcagatagccttttca
agttatgggattaaatggctggtgctcgcttacgctcgcttagaaactttttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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