KEGG   Sedimentitalea sp. W43: EBB79_05520Help
Entry
EBB79_05520       CDS       T05780                                 

Definition
(GenBank) methionine--tRNA ligase
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
sedi  Sedimentitalea sp. W43
Pathway
sedi00450  Selenocompound metabolism
sedi00970  Aminoacyl-tRNA biosynthesis
sedi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sedi00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    EBB79_05520
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    EBB79_05520
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sedi01007]
    EBB79_05520
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sedi03016]
    EBB79_05520
Enzymes [BR:sedi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     EBB79_05520
Amino acid related enzymes [BR:sedi01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   EBB79_05520
Transfer RNA biogenesis [BR:sedi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    EBB79_05520
 Prokaryotic type
   Other AARSs
    EBB79_05520
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: tRNA-synt_1g tRNA-synt_1 Anticodon_1 ProSAAS
Motif
Other DBs
NCBI-ProteinID: AZV77403
UniProt: A0A3T0N045
Position
complement(1122864..1124582)
Genome map
AA seq 572 aa AA seqDB search
MARILITSAIPYINGIKHLGNLVGSQLPADLYARYHRGRGNEVMFLCATDEHGTPAELAA
AKADKPVDEFCAEMHQVQAGIAKGFGLSFDHFGRSSSPQNHKLTQHFAGKLAENGLIREV
VEKQVYSNADGRFLPDRYIEGTCPNCGYDKARGDQCEECTKQLDPTDLIDPRSAVSGSID
LEVRETKHLYLCQSTLKDQLDDWINSKHDWPVLTTSIAKKWLHDGDGLRDRGITRDLDWG
ISVKKGDQDWPGMDGKVFYVWFDAPIEYIACAGEWAEANGKADTDWQRWWRTDKGADDVK
YVQFMGKDNVPFHTLSFPATILGSGEPWKLVDHLKSFNYLNYDGGQFSTSQGRGVFMDQA
LEILPADYWRWWLLSHAPESSDSEFTWENFQQSTNKDLADVLGNFVSRITKFCRAKFGEV
VPEGGAYGEQELALIAELTTRIRAYETQMEAIEVRKSAQELRAIWVAGNEYLQSAAPWST
FKTDPEKAATQVRMGLNLIRLYAVLSAPFIPTAAASMLSAMNTLDTRWPDDVAAALDALP
AGHDFAVPEVLFAKITDDQVEDWRQRFSGVRD
NT seq 1719 nt NT seq  +upstreamnt  +downstreamnt
atggcacgaattctcattacctcggcgatcccttatatcaacgggatcaaacatctgggc
aatctggtgggcagtcagctgccagccgatttatatgcccgctaccatcgtggccgtggc
aatgaagtgatgtttctctgcgccaccgacgaacacggcaccccggccgagctggctgcc
gccaaggcagacaaaccagtcgatgaattctgcgccgagatgcaccaggttcaggccggt
atcgccaaggggtttggccttagctttgaccattttggccgctcaagcagcccgcagaac
cacaagctgacccagcatttcgcaggcaaactggccgaaaacggcctgatccgcgaagtg
gtcgaaaagcaggtctactctaacgccgatggccgttttctgccggaccgctatatcgag
ggcacctgccccaactgcggctacgacaaggcgcgcggcgaccaatgcgaggaatgcacc
aagcagctggaccccaccgacctgatcgacccacgctctgccgtgtcgggatcgatcgac
cttgaggtgcgcgagaccaaacatctgtacctgtgccaatccaccctgaaggaccagctg
gacgattggatcaattcgaaacatgactggccagtgctgaccacctcgattgccaagaaa
tggctgcatgacggtgacgggctgcgtgaccggggcatcacccgcgatctggactggggc
atttcggtcaaaaaaggtgatcaggactggcccggcatggacggcaaggtgttctatgtt
tggtttgatgcccctatcgaatacatcgcctgcgcaggcgagtgggccgaggccaatggc
aaggctgacaccgactggcagcgctggtggcgcaccgacaagggcgcggacgacgtcaaa
tatgtgcagttcatgggcaaggacaacgtgcccttccacaccctgtcctttccggcgacc
attctgggctcgggcgagccatggaaacttgtggaccacctgaaatcgttcaactacctg
aattatgacggcggccagttctcgacctcgcaggggcgcggcgtcttcatggatcaggca
ctggagatcctgccggccgactactggcgctggtggttgctgtcacacgcccccgaaagc
tcggattcggaattcacctgggaaaatttccagcaatcgacaaacaaggatctggccgac
gtactgggcaactttgtcagccgcatcaccaaattctgccgcgccaagtttggcgaagtg
gtgcccgagggcggcgcatatggtgaacaagaactggcgctgatcgctgaactgaccacc
cgcatccgcgcttatgagacccagatggaggccatcgaggtccgcaaatcggcgcaggag
ctgcgcgcgatctgggtggccggcaacgaatatctacaaagcgccgcaccctggtcgacc
ttcaaaaccgacccggagaaagccgcgacgcaggtccgcatgggtctgaacctgatccgc
ctttatgcagtgctgagtgcccccttcattcccaccgctgccgccagtatgctgagtgcg
atgaacacgctggacacccgctggccggacgatgtagccgccgcgctggacgcgctgccc
gctggccacgattttgcagtgcccgaggttctgtttgccaaaatcaccgacgatcaggtc
gaggactggcgacagcggttctctggggttcgcgactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system