KEGG   Parasedimentitalea marina: EBB79_05690
Entry
EBB79_05690       CDS       T05780                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sedi  Parasedimentitalea marina
Pathway
sedi03410  Base excision repair
sedi03430  Mismatch repair
sedi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sedi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EBB79_05690 (recJ)
   03430 Mismatch repair
    EBB79_05690 (recJ)
   03440 Homologous recombination
    EBB79_05690 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sedi03400]
    EBB79_05690 (recJ)
DNA repair and recombination proteins [BR:sedi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     EBB79_05690 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     EBB79_05690 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      EBB79_05690 (recJ)
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH GapR_DNA-bd Prok-RING_1
Other DBs
NCBI-ProteinID: AZV77432
UniProt: A0A3T0N0C9
Position
complement(1154526..1156268)
AA seq 580 aa
MGFLNVEQSLTGRCWQGPGVDIMRAAEAMAQQSEIPAPVCQVLARRGVPSHEAAGFLTPQ
LKDLLPDPRRMKDMEVAAQRFLLAVQRRERIAVFADYDVDGGGSAALLLVWLRQMGLGAT
LYVPDRIDEGYGPNDDAMAALARDHDLIICVDCGTLSHGPIAAAKGADVLVVDHHLGGET
LPDCVAVVNPNRQDEDGELGYFCAAGVVFLMLVEARRQLREAGHGTGPDLMALLDLVALA
TVADVAPLIGANRALVRQGLKVMAARQRPGLVALADVSRMDSAPSTYSLGFMLGPRVNAG
GRIGKADLGARLLATDDPHEASSIAERLDQLNTERRDIENAVRAAAMEQAESRGFDAPLV
WAAGEGWHPGVVGIVASRLKEAAGRPAVVIGLDGDEGKGSGRSVSGIDLGAAIQRLASDG
LLIKGGGHKMAAGLSVKRDQLEAAMARLTELLEKQGAGDLGPADLKLDGLLMPGAATVDM
IEQIEQAGPYGAGAPAPRYAFPDLQIRFAKRIGETHLKLSLSDGIGGGIDAICFGAFDTP
MGQKLLDHGGARFHFAGRLEINTWGGRQSAQLRLEDAAPA
NT seq 1743 nt   +upstreamnt  +downstreamnt
gtgggatttctgaatgttgagcaatcgctgaccggacgctgctggcagggaccgggtgtg
gatatcatgcgcgcggcggaagcaatggcgcagcaaagcgagatcccggcaccggtctgt
caggttctggcgcggcgcggcgttccaagccacgaggcggcagggtttctgactccgcag
ttaaaggatctgctgcccgacccgcgccgcatgaaagacatggaagtggcggcgcagcgt
ttcttgctggcggtgcagcgccgcgagcggattgcggtctttgccgattatgacgttgat
ggtggtggctcggcggccctgttgctggtctggttgcgccaaatgggactgggggcgacg
ctctatgtgccggaccgcattgacgaaggatacggccccaatgacgatgccatggccgcc
ctggcgcgcgatcacgatctgattatctgtgtcgattgcggcaccctgagccatgggccg
attgcagccgccaagggcgccgatgtgctggtggtggaccatcacctgggcggtgaaacc
ctgcccgattgcgtggcggtggtgaacccgaaccggcaggacgaggatggcgagctgggc
tatttctgcgccgccggtgttgtcttcttgatgctggtcgaggcccgccgtcaactgcgc
gaggcaggccatggcactggtcctgacctgatggcactgctggatctggtggcactggcc
acggtcgcagatgtcgccccgctgattggcgccaaccgtgcgctggtccggcaaggatta
aaggtgatggccgcccgccaacgccctggtctggtggcgctggcggatgtctcgcgaatg
gattcggcgccctcgacctatagtctggggttcatgctgggcccccgcgtcaacgcaggc
ggtcgcatcggcaaagccgatttgggcgcgcggttgctggcgaccgatgatccgcatgag
gcctcatcaattgcggagcggttagaccagttgaacaccgagcgtcgcgacattgaaaat
gcagtgcgcgcggcggccatggaacaggccgagagccgtggttttgacgcgccactggtc
tgggccgccggtgagggctggcacccgggtgtggtgggcattgttgcctcgcgcctgaaa
gaggccgccggacgacctgcggtggtgatcgggctggacggcgatgagggcaagggctcg
gggcggtcggtcagcggtatcgatctgggcgcggctatccaacggctggccagcgacggc
ttgctgatcaagggcggcggtcacaagatggcggcggggctgagtgtaaagcgggaccag
ctggaggcagccatggcccggctgaccgagctgctggaaaaacagggcgctggcgatctg
gggcctgcggacctgaaactggacggtctgctgatgccaggggccgcgacggtggatatg
atcgagcagattgagcaggccggaccctatggcgccggcgcccctgccccgcgctatgcc
tttcctgatctgcagatccggtttgccaaacggattggcgagacgcatctgaaactgtcg
ctcagcgatggcatcggcggcggcattgacgcgatctgttttggggcctttgacacgcca
atgggtcaaaaattactggatcacggcggtgcgcgtttccattttgccgggcgactggag
atcaacacttggggcggccggcaaagcgcccaattgcgtctggaagatgctgcaccggcc
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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