KEGG   Parasedimentitalea marina: EBB79_09935
Entry
EBB79_09935       CDS       T05780                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
sedi  Parasedimentitalea marina
Pathway
sedi00230  Purine metabolism
sedi00240  Pyrimidine metabolism
sedi01100  Metabolic pathways
sedi01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:sedi00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    EBB79_09935
   00240 Pyrimidine metabolism
    EBB79_09935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sedi03400]
    EBB79_09935
Enzymes [BR:sedi01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     EBB79_09935
DNA repair and recombination proteins [BR:sedi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    EBB79_09935
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: AZV78163
UniProt: A0A3T0N2B3
Position
2012674..2016330
AA seq 1218 aa
MKIERKFTTAGRDAYADLNFISATSEIRNPDGTIVFRLDNVKVPSSWSQVASDVIAQKYF
RKAGVPSRVKKIREKNVPEFLWRSVPDGDDVEFGGETSSKQVFDRLAGAWAYWGWKGGYF
TTEEDAQAYYDEMRFMLASQRAAPNSPQWFNTGLHWAYGIDGPAQGHHYVDHKTGKLTKS
NSSYEHPQPHACFIQGVQDDLVNEGGIMDLWVREARLFKYGSGTGTNFSHLRGAGEALSG
GGKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVIVDADHPDIEQFIEWKVLEEQKVASI
VAGSKMHEKMLNSIFEAIRSWDGAEADAYDAASNTTLKTAIREAKKMMIPETYIKRVLDY
AKQGHTSIEFPTYDTDWDSEAYNSVSGQNSNNSIRVTNAFLTAVEKNADWQLINRTDGKV
SKTIKARDLWDRVGHAAWACADPGIQYHDTVNDWHTCPADGEIRGSNPCSEYMFLDNTAC
NLASINLLTFLKDGTFQAEDYMHACRLWTMTLEVSVMMAQFPSKEIAQLSYDFRTLGLGY
ANIGGLLMNMGHGYDSDEGRSLCGALTALMTGVAYTTSAEMAGELGPFDGYGRNAENMLR
VIRNHRNAAYSKTDGYQGLSVNPVPLDLHNCPDARLTDLAKSAWDEALTLGEKHGYRNAQ
TTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRSVPSALEGLGYSSSQI
EEITGYAVGHGTIGNAPAINHTSLAGHGFGPNELSKIDAALESAFDIRFVFNQWTLGEDF
CTGVLGIPTPKLNDPTFDLLRHLGFTKADIEAANDHVCGTMTLEGAPHLKQAHYHIFDCA
NACGKKGKRFLPVDSHITMMAAAQSFISGAISKTINMPNDATIEDCLNAYELSWSLGIKA
NALYRDGSKLSQPLAAALVEDDDDAAEVLETGNVHEKAAVLAEKIVEKVIVKEIIKSHRE
KMPHRRKGYTQKAVVGGHKVYLRTGEYEGGTLGEIFIDMHKEGAGFRAMMNNFAIAVSVG
LQYGVPLEEFVDAFTFTKFEPAGMVQGNDSIKNATSILDYVFRELAVSYLDRTDLAHVKP
EGATFDDIGRGEEEGVSNVSEISETAASRSLEVLKQISSTGYLRKRMPQDLVVLQGGQND
VTGLTDGADPVSSLQTLVPETNSAAAAPSLGNPGMTARTKAKMQGYEGEACNECGNYTLV
RNGTCMKCNTCGGTSGCS
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgaagattgaaagaaagttcaccaccgccgggcgggatgcctatgcagatctgaatttc
atctctgcaacgtcggaaatccgaaatccggacggaacaatcgtgtttcgtctcgataac
gtaaaagtaccatcaagctggagccaagtcgccagcgatgtgattgctcaaaagtatttc
cgcaaagccggcgtgccatctcgtgttaaaaagatacgtgagaagaacgtgccagaattc
ctgtggcggtcggttcccgacggcgatgatgttgagttcggcggcgagacttcctcaaag
caggtgtttgaccggttggcgggggcttgggcttattggggctggaaaggtggctatttc
accaccgaggaagacgcacaggcctattatgacgagatgcgtttcatgttggccagccag
cgcgcggcgcccaatagtccgcagtggttcaataccgggttacattgggcttatggtatc
gatggtccggcgcagggtcaccattatgtggatcacaagactggtaaactgaccaagtcc
aacagttcctacgagcatccccagccacacgcctgcttcattcaaggcgtgcaggacgat
ctggtcaacgagggtggcattatggatctttgggtgcgcgaagcgcgcctgttcaaatat
ggctccggaacgggcaccaattttagccacttacggggtgcgggtgaggccctgtccgga
ggtggcaagtcttcgggtctgatgggtttcctgaaaatcggagaccgggcagccggtgcg
atcaaatcgggcggcaccacgcgccgcgccgctaagatggttatcgtcgacgcagaccac
cccgatattgagcaattcatcgagtggaaggtgctcgaagagcaaaaggttgcctctatt
gttgccgggtccaaaatgcatgagaagatgctgaacagtatctttgaggcgatccggtcc
tgggatggcgccgaggcagatgcctatgacgcggccagcaacacaacgttgaagacggca
atccgcgaagccaagaagatgatgattcctgaaacctatatcaaacgggttttggattac
gccaaacagggccacaccagcatagaattcccgacctatgacaccgactgggattccgag
gcctataactcggtttcagggcagaactcgaacaattcgatccgggtcaccaatgctttt
ctgaccgccgttgaaaagaacgctgattggcagttgatcaaccgcaccgatggcaaggtt
tcaaaaaccatcaaggcgcgcgatctgtgggaccgggttggccacgccgcctgggcctgt
gcggatccgggcattcagtatcacgacacggttaacgactggcacacctgtccggccgac
ggtgagattcgcggatcgaacccctgttccgaatacatgttcctggacaataccgcctgt
aatctggcgtcgatcaacctgctgaccttccttaaggatggcacgttccaggccgaggac
tatatgcacgcctgccgtctgtggacgatgacgctggaagtgtcggtgatgatggcgcag
ttcccgtccaaggaaatcgcgcaactgtcctatgatttccgtacgttaggcctgggctat
gccaatattggcggcttgctgatgaacatgggtcacggctatgacagtgacgaaggccgc
tccctctgtggtgcgctgacggcgctaatgaccggtgttgcctacaccacttcagctgaa
atggctggagaactgggtccgtttgacggctatggccggaacgctgaaaatatgctgcgg
gtgatccgcaatcaccgcaacgccgcctatagcaagacggatggttaccaggggttatca
gtcaatccggtgcctctggacctgcacaattgccctgacgcacggctgacggatctggcc
aaaagcgcctgggacgaggcgctgacgctgggtgaaaaacacggctaccgcaatgcccag
accacagtgattgccccaaccgggaccatcggtctggtgatggactgcgacaccaccgga
attgagcctgactttgcattggtcaaattcaagaaactggctggtggcggttatttcaaa
attatcaaccgatcggtgccgtcggcattggaaggtctggggtattcctcgtctcaaatc
gaagagatcaccggctatgcagtgggccacggcactatcggcaatgcgccagctatcaac
catacttcgctggcggggcatgggtttggcccgaatgagctgtccaagattgatgccgct
ttggaaagcgcctttgacatccgctttgtcttcaatcagtggaccctgggcgaagatttc
tgcaccggtgttctgggaatccccacgcccaagctgaacgatccgacctttgatttactg
cgccatcttggttttaccaaggccgacatcgaggctgccaatgaccatgtctgtggcacc
atgacgctggaaggtgcaccgcatctgaagcaagcgcattatcacatctttgattgcgcc
aatgcttgcggcaagaaaggcaaacgtttcctgccggtagatagccacatcaccatgatg
gctgcggcgcagtcgtttatctcgggggctatctccaagacaatcaatatgccgaacgat
gccactatcgaggattgcctgaacgcatatgagctaagctggagcctgggcattaaagcc
aacgcgctttaccgcgacggatcaaagctaagccagccgcttgcagcggcactggttgaa
gatgatgacgacgcggccgaagtgctggaaaccggcaacgtccatgaaaaggccgctgtt
ctggctgaaaaaatcgtggaaaaagtcatcgtcaaagagatcatcaaatcgcaccgcgag
aagatgccacatcgccgcaagggttatactcaaaaggcggttgttggtggccataaagtc
tatctgcggaccggcgagtatgagggcggcaccctgggtgagatcttcatcgacatgcac
aaagaaggcgctggctttcgggcgatgatgaacaattttgccattgcggtctcggttggc
ctgcaatacggcgttccgctcgaagaattcgttgatgcatttacctttaccaagtttgaa
cccgccggcatggttcagggcaacgacagcattaagaatgcaacgtcaattctggactat
gtgttccgggagttggcagtcagctatctggaccgcaccgatctggcgcatgttaaacct
gagggcgcgacatttgatgatatcggacgtggcgaggaagaaggcgtatcaaacgtttct
gaaatcagtgaaaccgccgccagtagatcgctggaggtgctcaagcagatttcttcaacc
ggctatctgcgcaagcggatgccgcaggatcttgtggttcttcagggcgggcaaaacgac
gttacaggtttaacggacggtgccgatccggtgtcatctttgcaaactttggtgcctgaa
acaaactcagctgctgcggcacctagcttgggcaatcccggtatgacagcgcgcaccaag
gcaaaaatgcaaggctatgagggcgaggcctgtaacgagtgcggcaattacacattggtg
cgcaacggcacctgcatgaagtgtaacacttgcggcggcacatccggctgcagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system