KEGG   Parasedimentitalea marina: EBB79_18735
Entry
EBB79_18735       CDS       T05780                                 
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
  KO
K08316  16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
Organism
sedi  Parasedimentitalea marina
Brite
KEGG Orthology (KO) [BR:sedi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sedi03009]
    EBB79_18735 (rsmD)
Enzymes [BR:sedi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.171  16S rRNA (guanine966-N2)-methyltransferase
     EBB79_18735 (rsmD)
Ribosome biogenesis [BR:sedi03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    EBB79_18735 (rsmD)
SSDB
Motif
Pfam: Cons_hypoth95 UPF0020 MTS MethyltransfD12 N6_N4_Mtase Methyltransf_25 Methyltrans_SAM Methyltransf_31
Other DBs
NCBI-ProteinID: AZV79711
UniProt: A0A3T0N6W3
Position
complement(3840188..3840742)
AA seq 184 aa
MRIIAGDFRGRALAAVGKGDAGAHLRPTTDRVRESLFNVLNNTGVIPGARVLDLFAGTGA
LGLEALSRGASWVSFVDDGRVSSGLIRKNIDITGSKDSTSLIKRDALKLPRNPDAPYDLI
FLDPPYGKGLGEKALEVAADAGWIDDEALVVWEESTPMAAPEGYQLRDSRKYGDTHITLM
WRDI
NT seq 555 nt   +upstreamnt  +downstreamnt
atgaggatcatcgccggagattttcgcggtcgtgcccttgccgctgtgggcaagggcgac
gcaggcgcacatttgcgccccacgaccgaccgggtgcgcgaaagtctgttcaatgttttg
aacaataccggggtcattccgggtgcacgggttttggacctgtttgctggcaccggagcg
ttggggttggaggcgctgtcaaggggggcctcctgggtgagcttcgttgatgatgggcgg
gtgtcatcgggcctgatccgcaagaatatcgacatcacgggtagtaaggatagcaccagt
ttgatcaagcgggacgcgctgaagctgccccgcaatccggatgcgccgtatgatttgatt
tttctggatccgccttatggcaaaggcctgggcgaaaaagccctggaggtggctgccgat
gcgggctggatcgatgacgaggcattggtggtctgggaagaaagcaccccgatggccgcg
ccagagggctatcaattacgcgacagtcgtaagtatggtgacacccatatcaccctgatg
tggcgggatatttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system