KEGG   Sedimenticola thiotaurini: AAY24_05370
Entry
AAY24_05370       CDS       T03943                                 
Name
(GenBank) hypothetical protein
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
seds  Sedimenticola thiotaurini
Pathway
seds03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:seds00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AAY24_05370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:seds03400]
    AAY24_05370
Enzymes [BR:seds01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AAY24_05370
DNA repair and recombination proteins [BR:seds03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AAY24_05370
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: AKH19873
UniProt: A0A0F7JYX9
Position
complement(1204089..1207298)
AA seq 1069 aa
MLHLYHSNRLEQLTDLLADTLRQPLADPLATETIVVQHPGMGRWLSLQLARRLSVCANVT
FPLPAGFIWQLLRQLLDDVPEVDGFKPELMQWWLFERLAQSLPTEGFEPLHRYLESDDEL
SRFQLAGEIANCFDQYLVYRPDWITRWQQGRSAMPDDHWQAALWRDLVASQSAEHWVDLQ
QRLARMVEHGSIDPQRLPERISLFALNALSPGYLEILQLAGRWLDIHLFILNPTEGYWMD
LVSEEERGRRALESTDQGLYLEVGNPLLASMGGQGSDFLASLLNYDPGATEAFIEPSGES
LLHRLQRDILHAAEMDEWPDDAPVHGEDRSLQFHLCHSPMREVEVLHDQLLALLADDETL
QPSDILVMTPDMDSYAPYIEAVFGESVGRTHIPYTLSDRSQIAETPVVSLFMQLLAQPGG
RYPVDEIFALLEQPILHRRFGLTAADLPRIRQWLETVVIRWGRDGSERAALGLPLCGQNS
WQQGLDRLLLGYALPGDDEQLFQDLLPCDAVEGSDAQLLAGLYSFVTALFELEPLLREDA
SPADWVVRLNSLIDRFFEPDEAESRLVQLLRSSVARLAETAALAGYSGMLSRDLLIAQLQ
DQLAAPSGGRFLGGGVSFCALTPMRALPFRVICMIGMNDGSFPRERRPVGFDLMAGNRRQ
GDRSRRADDRYLFLETLISARDLLYFSYVARDIRDNTPLPPSVLVSELMDYLDDRYGTDQ
PGSLSQELSVCHPLQPFNPRYFVPDTGLFSFDTANCQGAKALLAPTGQPGRFIRQPLGEP
EEQWRQVELTQLIRFYDNPVRYLLSARLGITIAYEQAGMESRDPFELDYFQRSDLFQRLV
QRALQGGDPAQQLSVERARGILPHGTHGEVHFERLAERARQWADQLQPLYPAETRVISVD
FHHQALRLVGRLEQVSADGLLGYSLEKIPDRQLLALWIRHLVLNVAAPEGVAPTTRWLGG
EGLVTLHPVVDAEARLGELLDLYWQGLQWPLPLFARSARAYANALAEDKPRETGLKRARD
RWFGGYQGYAEYDNPYYRLAFPDGEVLDERFEAVSEQVFLPLLLAMEVS
NT seq 3210 nt   +upstreamnt  +downstreamnt
atgctgcatctctaccatagcaatcgactggaacagctgaccgacctgctggccgatacc
ctccgccagccattggcagatccgctggcgaccgaaaccattgtggtgcagcatcccggt
atgggacgctggctctccctgcaattggcccgacgtctctccgtctgcgccaacgtgaca
ttcccgttacccgccggtttcatctggcagctgctgcgccaattgctggacgatgtgccg
gaggtggatggttttaaaccggagctgatgcagtggtggctgtttgagcggctggcacaa
agcctgccaacagaggggtttgagccgctgcaccgttacctggaatcggatgatgagctg
tcccggtttcagcttgccggcgagattgccaactgttttgatcagtatctggtctatcgg
cccgactggataacccgttggcagcagggccgcagtgcgatgcccgatgaccattggcag
gcggcactgtggcgcgacctggtggccagtcaatctgccgaacactgggtcgatctgcag
cagcgcctggcccggatggtggagcatgggtccatcgatccgcaacgcctgccggaacgg
atcagcctgtttgccctgaatgccctgtcacctggctacctggagattctccaacttgcc
ggccgctggctcgacatccacctgtttatcctgaatccgaccgaaggttactggatggac
ctggtctcggaggaggagcgtggccggcgtgccctggagagcacggatcaggggctctat
ctggaggtgggtaatcccctgctggcctccatgggcgggcaggggagtgatttcctggcg
tcgctgctgaattacgatccgggtgccactgaagcgttcattgaaccatccggggagagt
ctgctgcaccgactgcagcgcgacatcctgcatgccgccgagatggatgaatggcccgat
gatgctccggtgcatggggaagaccgctcgttacagttccatctctgtcacagccccatg
cgtgaagtggaggtgctgcacgatcaattgctggcgttgctggccgatgacgagaccctg
cagcccagtgatattctggtgatgactccggatatggacagctacgcaccctacatcgag
gcggtgtttggtgagtcggtcggtcgtacccacatcccctataccctgtcggatcgcagt
cagattgctgaaacccccgttgtttcgctgtttatgcaactgctggcccagccgggcggc
cgttatccggtggatgagatttttgcccttctggagcagcctatcctgcatcgccgcttc
ggtctgaccgcggctgatctgccccgaattcgccaatggctggaaaccgtagtcatacgc
tgggggcgggatggctcggagcgggcggcgctgggcctgcctttgtgcggacagaacagc
tggcaacagggactggaccgcctgttgctggggtacgcgctgccaggtgatgatgaacaa
ctgttccaggacctgctgccctgtgatgcggtggaggggagtgatgcacagctgttggcg
gggctatacagttttgtcacggccctgtttgagctggaaccactgctgcgggaggatgcc
tcacccgcggactgggtggtacggctgaacagtctgatcgaccgctttttcgagcccgat
gaggcggagtcccgcctggtccagctgctgcgcagcagtgttgcccggctggccgagact
gccgcactggccggttatagcggcatgctttcccgggatctgttgatcgcccagttacag
gatcagcttgccgcgccgtcgggagggcgttttctggggggtggtgtcagtttctgtgcc
ctcacgccgatgcgggcactgccattccgggtgatctgcatgatcggcatgaacgacggc
agcttcccccgggaacggcgcccggtgggattcgatctgatggccggcaatcggcgtcag
ggtgaccggtcacgacgggcagatgaccgctacctgtttctggagaccctgatctcggcc
cgggatctgctctatttcagctacgtggcccgggatatccgggacaacacgcccttgcca
ccttcggtgttggtaagcgaattgatggattatctggatgaccggtatgggacggatcag
cccgggtccctgtcccaggagttgagtgtctgccatccgttacagcccttcaatccacgc
tatttcgtaccggacaccggactgttcagttttgataccgccaactgccagggggcaaag
gcgctgctggcaccgacgggtcagccgggtcgttttatccggcagccgcttggggagccg
gaagagcagtggcggcaggtggagctgacccagctgatccgtttttatgataatccggtg
cgttatctgttatcggccaggctcggtatcaccatcgcctatgagcaggccgggatggag
agtcgggatccctttgagctggactattttcaacgcagtgacctgttccagcggctggtg
cagcgggcattgcaggggggcgatccggcccagcaactgagcgtggagcgggcccgcggc
atcctgccccacggcacccatggagaggttcattttgagcgcctggctgagcgtgcccgg
caatgggccgatcagttgcaaccactctacccggcggagacccgggtgatcagtgtcgat
ttccatcaccaggcgctgcggctggttggccggctggaacaggtctctgccgacggtctg
ctcggctattcactggagaagattcccgatcgccaactccttgcattgtggatcaggcac
ctggtgttgaatgtcgccgctccggaaggggtggcgccgaccacccgctggctcggtggt
gaagggttggtgacccttcatccagtggtcgatgcagaggcccgtttgggtgagctgctg
gatctctactggcagggacttcagtggccgttacccctgtttgcccgcagtgcccgggcc
tatgccaacgcactggcagaggataagccccgtgaaacgggactgaaacgggcccgggac
agatggtttggcggctaccagggatacgccgagtatgacaatccctactaccggctcgcc
ttccccgatggcgaggtgctggatgaaaggtttgaggctgtgagtgagcaggtcttcctg
ccgctgcttttggccatggaggtgagttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (47)   

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