KEGG   Sedimenticola thiotaurini: AAY24_11930
Entry
AAY24_11930       CDS       T03943                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
seds  Sedimenticola thiotaurini
Pathway
seds03030  DNA replication
seds03410  Base excision repair
seds03420  Nucleotide excision repair
seds03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:seds00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AAY24_11930
   03410 Base excision repair
    AAY24_11930
   03420 Nucleotide excision repair
    AAY24_11930
   03440 Homologous recombination
    AAY24_11930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seds03032]
    AAY24_11930
   03400 DNA repair and recombination proteins [BR:seds03400]
    AAY24_11930
Enzymes [BR:seds01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AAY24_11930
DNA replication proteins [BR:seds03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AAY24_11930
DNA repair and recombination proteins [BR:seds03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AAY24_11930
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AAY24_11930
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc V4R
Other DBs
NCBI-ProteinID: AKH20939
UniProt: A0A0F7K020
Position
complement(2589080..2591797)
AA seq 905 aa
MTAESPFILVDGSSYLFRAYHALPPLTNSRGEATGAIVGVVNMLRKLMIEYQPTHMAVVF
DAPGGSFRNEMYDQYKANRPPMPDELREQIEPLHRIVEAMGLPLLVVPGVEADDVIGTLA
TQASRAGMQTLISTGDKDLAQLVDGHVTLINTMTDSRLDRQGVVDKFGVKPEQIIDYLAL
VGDTSDNIPGIPKCGPKTAVKWLSAYGSIEGIKAHADEIKGKVGEYLREHLEQLDLSRRL
TTIKLDIELAQGPDDLQPTQPDLAALREWYSRIEARRLLDTLEQESGEAVGESVSNSADD
LEQNYEQVLDREVFSAWLERLRAAGEFAFDTETTSLDYMQAELVGVSFALQPGEAAYVPV
AHCYPGAPEQLERDWVLEQLKPLLEDPHCRKIGQNLKYDMSVLARYGITLRGVAFDTMLE
SYVLDSTATRHDMDSLAQKYLGVKTIKYEDVAGKGAKQLRFDQVPLEKAVPYAAEDAEIT
LRLHQALWPALQAEGELAGLLQSLEIPLVPVLSRMERCGVRIDSKLLHQQSQELAKRMHE
LEQQAYAVAGRSFNLSSPKQIGQIFFEELELPVVAKTPKGAPSTAESVLQELAEQGYELP
ALILEHRGCAKLKSTYTDKLPQMVNPETGRVHTSYHQAVAATGRLSSSDPNLQNIPVRSD
QGRRIRQAFIADAGCRIVAADYSQIELRIMAHLSGDAGLLKAFAAGVDIHQATAAEVFGV
DSVEQVTADQRRSAKAINFGLIYGMSAFGLAKQLGIERAAAQQYVDLYFDRYPGVRAYMD
RMREEAHAKGFVETVFGRRLHLPEINARNKMRQAAAERTAINAPMQGTASDIIKRAMLAV
DGWIEKERPPVKMVMQVHDELVFEVAEAELEPVCERIRGYMESAASLEVPLLVDIGVGDN
WDEAH
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgactgcagaaagcccgtttatcctggtcgatggctcctcatacctgttccgtgcctac
catgcgctgccaccactgaccaactcccgtggtgaggcaaccggtgccatcgtcggggtg
gtgaatatgctgcgcaagctgatgattgagtaccagccaacccatatggcggtggtgttc
gatgcccctgggggaagcttcagaaacgagatgtatgaccagtacaaggccaaccgtccg
cccatgccggatgagctgcgggagcagattgaaccgctgcaccgcatcgtggaggcgatg
ggattgccactgttggtcgtgccgggagtggaggcggatgatgtcatcggtactctggcc
acccaggcatcccgggccggcatgcagaccctgatctccaccggtgacaaggatctggcc
cagctggtggatggccacgtcaccctgatcaacaccatgaccgatagccggctggatcgc
cagggtgtggtggacaagttcggcgttaagccggagcagattatcgattatctcgccctg
gtgggtgacacctcggacaatattccggggatccccaaatgcggtccgaaaacggcggtc
aaatggctttctgcctacggttccatcgaggggatcaaggcgcacgccgacgagatcaag
ggcaaagtcggggagtacctgcgggagcacctggaacagctggatctctcccgtcgtctg
actacgatcaaactggatattgagctggcccaggggccggatgacctgcagcctacccag
ccggacctggcggcgctgcgtgaatggtacagccggatcgaggcacgccggctgttggac
acgctggagcaggagagcggggaggccgtcggggagtccgtatccaacagcgctgacgac
ctggagcaaaattatgaacaggtgctagaccgggaggtcttcagtgcctggctggagcgg
ttacgtgcagcgggtgagttcgccttcgataccgagaccaccagtcttgactacatgcag
gcggagctggtcggcgtctcattcgccctgcagccgggagaggcggcctatgtgccggtg
gcccactgttatcccggtgcgcctgaacagctggagcgggactgggtgctggaacagctt
aaacccctgctggaggatcctcactgccgcaagatcggtcagaacctgaagtacgatatg
agtgtgctggcccgttacggtattaccctgcggggagtcgccttcgacaccatgctggaa
tcctacgtgctggactccaccgccacccgccatgatatggattcgttggcacaaaagtac
ctgggagtgaagactatcaagtacgaggatgtggcaggcaagggggccaagcagctccgc
tttgatcaggtgccgttggagaaagcggtaccctatgcggcggaggatgcggagatcacc
ctgcggctgcatcaggcgctctggccggccctgcaggcagagggcgaattggccggtctg
ctgcagagcctggagattcccctggtgccggtgctgtcccgtatggagcgttgtggtgta
cgtatcgattcgaagctgctgcatcagcagagtcaggagctggccaagcggatgcatgag
ctcgagcagcaggcctatgcggtggccgggcgcagcttcaacctcagttcccccaagcag
atcgggcagatattttttgaagagctggagctgccagtggtggccaagacccctaagggt
gctccgtccacggcggagtcggtattgcaggagctggccgagcagggctatgagctgccg
gccctgatcctggaacaccggggttgcgccaagttgaagtcgacctacacagacaagctg
ccccagatggttaatccggagaccgggcgggtgcacacctcctatcatcaggcggtggcc
gccaccgggcgtctcagttcgtccgatcccaatctgcagaacatcccggtgcgcagcgac
cagggacggcgtattcgccaggcattcattgccgacgcggggtgtcgtatcgtggcggcc
gactactcccagatcgaactgcggatcatggcccacttgtccggtgatgcgggtttgctg
aaagcgtttgccgccggggtggatatccaccaggcgaccgccgcagaggtatttggggtc
gacagtgtggagcaggtgacggcggatcagcggcgctctgccaaggcgatcaatttcggt
ctgatctacggtatgtccgcattcggcctggccaaacagctgggcatcgagcgggccgcg
gcccagcagtacgtggatctctattttgaccgctatcccggggtgcgggcctacatggac
cggatgcgggaggaggcccatgccaaggggttcgtggagacggtgtttggccgccggctg
catctgccggagatcaatgcccggaacaagatgcgtcaggcggcggcggaacgcaccgcg
atcaatgcgccgatgcagggtaccgcttcagatatcatcaagcgtgccatgctggcggtg
gatgggtggatagagaaagagcgtccgccggtgaaaatggtgatgcaggtgcatgacgag
ctggttttcgaagtggcggaggcggaactggagccggtttgtgaacggattcgtggctat
atggagtcggccgccagcctggaggtcccgctgttggtggacatcggcgtcggggataac
tgggatgaagcgcattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

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