KEGG   Sedimenticola thiotaurini: AAY24_16005
Entry
AAY24_16005       CDS       T03943                                 
Name
(GenBank) endonuclease VIII
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
seds  Sedimenticola thiotaurini
Pathway
seds03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:seds00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AAY24_16005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:seds03400]
    AAY24_16005
Enzymes [BR:seds01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AAY24_16005
DNA repair and recombination proteins [BR:seds03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AAY24_16005
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS C1_1
Other DBs
NCBI-ProteinID: AKH21614
UniProt: A0A0F7K231
Position
complement(3476782..3477609)
AA seq 275 aa
MPEGPEIRRAADQVAEALQGRPLRRVRVGQGYLKPLISALTGQRVIRVDTLGKAMLTRFD
NGLTLYTHNQLYGRWKTGPADLPADGRRQLRIALVTDRSAAHLYSATTIELLNDQQVGDH
PFLSRLGPDILHPETDKACLLERLSRNTFRNRRLGQLLTDQSFVAGLGNYLRCEILFVSG
LHPDLRPTDCHPAQLESLTDALLELPARSYHSGGITNDPARAQRLMADGATFEQARFHLF
RREGLPCYHCGEPIRKSRNAGQACYLCSRCQPAKT
NT seq 828 nt   +upstreamnt  +downstreamnt
atgcctgaagggccggagatccgccgtgctgcggaccaggtggcagaggccctgcagggc
cgaccactgcgccgggtaagggttggccagggctatctgaagcccctgatcagcgccctc
accgggcagcgggtaatccgggtcgataccctgggcaaggcgatgctgactcgcttcgat
aacggcctgactctctacacccacaaccagctctacggccgttggaagaccggccctgcc
gacctgcccgctgatggccgccgccaactgcgcatcgccctggtcaccgaccgcagcgcc
gcccacctgtacagcgccaccaccattgagctgctgaacgaccaacaggtgggcgatcat
ccatttctgagcaggctggggccggacatactgcaccccgaaactgataaggcctgcctg
ctggagcgactctcccggaacacattccgcaaccggcgcctcggccagctgctgaccgac
cagagctttgtggccgggctgggcaactacctgcgctgtgaaatcctctttgtgagcggt
ctgcatcccgacctgcgcccgaccgactgccaccctgcccaattggaatcactgaccgac
gcactgctggagttgccggcgcgctcctaccacagcggtggcatcaccaacgaccccgcc
agggcgcaacgactgatggcggacggagccacctttgagcaggcgcgctttcacctgttc
cgacgggaggggctgccctgctaccattgcggtgagccgatccgaaaaagtcgcaacgcc
ggacaggcctgctatctctgtagccgttgtcagcccgccaaaacctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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