KEGG T02734: CFSAN002050

Salmonella enterica subsp. enterica serovar Cubana: CFSAN002050_02070

Entry

CFSAN002050_02070 CDS       T02734

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

seec Salmonella enterica subsp. enterica serovar Cubana

Brite

KEGG Orthology (KO) [BR:seec00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seec03032]
    CFSAN002050_02070 (gyrB)
   03400 DNA repair and recombination proteins [BR:seec03400]
    CFSAN002050_02070 (gyrB)
Enzymes [BR:seec01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CFSAN002050_02070 (gyrB)
DNA replication proteins [BR:seec03032]
Prokaryotic type
  DNA Topoisomerases
   CFSAN002050_02070 (gyrB)
DNA repair and recombination proteins [BR:seec03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CFSAN002050_02070 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB GyrB_insert DNA_gyraseB_C GyrB_hook Toprim HATPase_c HATPase_c_3 DUF6865

Other DBs

NCBI-ProteinID:

AGQ71334

Position

complement(107470..109884)

AA seq 804 aa
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV
VTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIQRDGKIHRQIYEHGVPQAPLAVTGDTDKTGTMVRFWPSHETFTNVT
EFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIALDGATLHANAHAPALSGEALEKLVSEYNATQKMIGRMERR
FPKALLKELVYQPTLTEADLSDEQTVTRWVNALITELNEKEQHGSQWKFDVHTNTEQNLF
EPIVRVRTHGVDTDYPLDHEFVTGAEYRRICTLGEKLRGLIEEDAFIERGERRQPVTSFE
QALEWLVKESRRGLAIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI

NT seq 2415 nt +upstreamnt +downstreamnt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtgcgt
aagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctgcaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcaggtcactgtaaagatatcgtc
gtgactattcacgccgataactccgtgtccgtaacggatgatggccgtggcattccgacc
gggattcacccggaagaaggcgtctcggcggcggaagtgatcatgaccgttctgcacgcg
ggcggtaaatttgatgataactcctataaagtctccggcggtctgcacggcgtgggcgtc
tcggtagtcaacgctctgtcgcaaaaactggaactggttatccagcgagatggcaaaatt
caccgtcagatctacgagcacggcgtgccgcaggcacccctggccgtcactggcgatacc
gataaaaccggcacgatggtacgtttctggccgagccacgaaaccttcaccaacgtcact
gaatttgaatatgagatcctggcgaaacgcctgcgtgaactgtcattcctgaactcaggc
gtctccatccgcctgcgcgacaagcgcgatggcaaagaagatcatttccactacgaaggc
ggcatcaaggcgtttgttgaatatctcaacaagaataaaacgccgatccacccgaatatc
ttctacttctccaccgaaaaagacggtatcggcgtcgaagtagcgctgcagtggaacgat
ggtttccaggaaaacatctactgctttaccaacaacattccgcagcgcgacggcggtact
cacctggcaggcttccgtgcggcgatgacccgtacgctgaacgcctacatggacaaagaa
ggctacagcaaaaaagccaaagtcagcgccaccggcgacgatgcccgtgaaggtctgatt
gcggtggtttccgtgaaggtgccggacccgaaattctcctcacagaccaaagataagctg
gtctcttccgaggtgaaatcggcggtagaacagcagatgaacgaactgctgagcgaatac
ctgctggaaaacccatctgacgcgaaaattgtcgtcggcaaaattatcgacgccgcgcgt
gcgcgtgaagcggcgcgtcgcgcccgtgaaatgacccgtcgtaaaggcgcgctggattta
gccggtctgccgggcaaactggcggactgtcaggaacgcgacccggcgctgtccgaactg
tacctggtggaaggggactccgcgggcggctctgcgaagcaggggcgtaaccgcaagaac
caggcgattctgccgctgaaaggtaaaatcctcaacgtcgagaaagcgcgcttcgacaag
atgctctcctctcaggaagtggcgacgctgattaccgcgctgggctgcggtatcggtcgc
gacgagtacaacccggacaagctgcgttatcacagcatcatcatcatgaccgatgcggac
gtcgacggctcgcacatccgtacgctgctgttgaccttcttctatcgtcagatgccggaa
atcgtcgagcgcggccacgtctacattgcgcagccgccgctgtacaaagtcaagaaaggt
aagcaggaacagtacatcaaagacgatgaagcgatggatcagtaccagatttccatcgcg
cttgacggtgcgactctgcacgcgaacgcccatgcgccggcgctatccggcgaagcgtta
gaaaaactggtctctgaatataacgccacgcagaaaatgattggtcgtatggagcgtcgc
ttcccgaaagcgctgctcaaagagctggtgtatcagccaactctgaccgaagccgatctt
tctgatgagcagactgtaacgcgctgggtgaatgcgctgattaccgagctgaatgagaaa
gagcagcacggcagtcagtggaagttcgatgttcatactaatacggaacagaatctgttc
gagccgatcgttcgcgtgcgtacgcatggcgtggataccgattatccgttggatcacgag
tttgtgaccggcgcggaatatcgtcgtatctgcacgctgggcgagaagctgcgcggtctg
attgaagaggacgcgtttatcgaacgcggcgagcgtcgccagccggtaaccagcttcgag
caggcgctggagtggctggtgaaagaatcacgtcgcggtctggctatccagcgttataaa
ggtctgggtgaaatgaacccggatcagctgtgggaaaccaccatggacccggaaagccgc
cgtatgctgcgcgtgaccgtcaaagatgcgattgctgccgaccagctgttcaccacgctg
atgggtgatgccgttgagccgcgtcgtgcctttatcgaagaaaacgccctgaaagcggcg
aacatcgatatttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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