KEGG   Salmonella enterica subsp. enterica serovar Heidelberg 41578: SEEH1578_12665
Entry
SEEH1578_12665    CDS       T02736                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
seeh  Salmonella enterica subsp. enterica serovar Heidelberg 41578
Pathway
seeh03030  DNA replication
seeh03430  Mismatch repair
seeh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:seeh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SEEH1578_12665 (holA)
   03430 Mismatch repair
    SEEH1578_12665 (holA)
   03440 Homologous recombination
    SEEH1578_12665 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seeh03032]
    SEEH1578_12665 (holA)
   03400 DNA repair and recombination proteins [BR:seeh03400]
    SEEH1578_12665 (holA)
Enzymes [BR:seeh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SEEH1578_12665 (holA)
DNA replication proteins [BR:seeh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SEEH1578_12665 (holA)
DNA repair and recombination proteins [BR:seeh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SEEH1578_12665 (holA)
SSDB
Motif
Pfam: DNA_pol3_delt_C DNA_pol3_delta DNA_pol3_delta_C DNA_pol3_gamma3
Other DBs
NCBI-ProteinID: AGQ64128
Position
complement(2547617..2548648)
AA seq 343 aa
MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAIRLAAASQGFEEHHAFTLDPSTD
WGSLFSLCQAMSLFASRQTLVLQLPENGPNAAMNEQLATLSELLHDDLLLIVRGNKLTKA
QENAAWYTALADRSVQVSCQTPEQAQLPRWVAARAKAQNLQLDDAANQLLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRPMIGDALQRLHPAQLRQ
AVQLLTRTEITLKQDYGQSVWADLEGLSLLLCHKALADVFIDG
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgatcaggttgtatcctgaacaactccgcgcgcagctcaacgaagggctgcgtgcggca
tatctgctattgggcaacgatccgctgctgctgcaggaaagtcaggacgctattcgtctg
gcggctgcgtcgcaaggcttcgaagagcaccacgcttttactctcgatcccagtaccgac
tggggatcgcttttctcactttgccaggcgatgagtctgttcgccagccgtcaaacgctg
gtgctgcaactgccggaaaacgggcctaacgcggcaatgaatgagcaactcgccacgctg
agcgagctgctgcatgacgacttgttattaatagtacgcggaaacaagctcaccaaagcg
caggaaaacgccgcctggtataccgcgctggcagaccgtagcgttcaggtcagttgtcag
acgccggagcaggcgcagcttccccgctgggtggccgccagagcgaaagcacagaatttg
caactggatgacgccgcgaaccaactgctgtgctattgctatgagggcaatctgttggcg
ctggcgcaggcgctggaacggctgtcgctgctttggcctgacggtaagttaacgcttcct
cgcgtggagcaggctgtcaatgacgccgcccactttacccctttccactgggtggatgcg
ttactgatggggaaaagcaaacgcgcgctgcatattctgcaacagctacgccttgaaggc
agcgaaccggttattctgctgcggaccctccagcgagagctgctgctactggtaaatctc
aaacgtcagtccgcgcatacgccgttacgcgcgctgtttgataaacaccgggtctggcaa
aaccgtcgccccatgatcggcgacgcgttgcagcgtctccatcctgcgcagcttcgccag
gccgtgcagttattgacgcgtacagaaattacgctcaaacaggattatggtcagtcggta
tgggcagatcttgaagggctgtcgctcctgctctgccataaggcgctggcagacgtattt
attgatgggtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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