KEGG   Salmonella enterica subsp. enterica serovar Typhimurium UK-1: STMUK_3823
Entry
STMUK_3823        CDS       T01743                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
sej  Salmonella enterica subsp. enterica serovar Typhimurium UK-1
Brite
KEGG Orthology (KO) [BR:sej00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sej03032]
    STMUK_3823 (gyrB)
   03400 DNA repair and recombination proteins [BR:sej03400]
    STMUK_3823 (gyrB)
Enzymes [BR:sej01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     STMUK_3823 (gyrB)
DNA replication proteins [BR:sej03032]
 Prokaryotic type
  DNA Topoisomerases
   STMUK_3823 (gyrB)
DNA repair and recombination proteins [BR:sej03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      STMUK_3823 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C GyrB_hook Toprim HATPase_c HATPase_c_3 DUF6865
Other DBs
NCBI-ProteinID: AEF09668
UniProt: A0A3Z2F2K5
Position
complement(4000155..4002569)
AA seq 804 aa
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV
VTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIQRDGKIHRQIYEHGVPQAPLAVTGDTDKTGTMVRFWPSHETFTNVT
EFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIALDGATLHANAHAPALSGEALEKLVSEYNATQKMIGRMERR
FPKALLKELVYQPTLTEADLSDEQTVTRWVNALITELNEKEQHGSQWKFDVHTNTEQNLF
EPIVRVRTHGVDTDYPLDHEFVTGAEYRRICTLGEKLRGLIEEDAFIERGERRQPVTSFE
QALEWLVKESRRGLAIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtgcgt
aagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctgcaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcaggtcactgtaaagatatcgtc
gtgactattcacgccgataactccgtgtccgtaacggatgatggccgtggcattccgacc
gggattcacccggaagaaggcgtctcggcggcggaagtgatcatgaccgttctgcacgcg
ggcggtaaatttgacgataactcctataaagtctccggcggtctgcacggcgtgggcgtc
tcggtagtcaacgctctgtcgcaaaaactggaactggttatccagcgagatggcaaaatt
caccgtcagatctacgagcacggcgtgccgcaggcacccctggccgtcactggcgatacc
gataaaaccggcacgatggtacgtttctggccgagccacgaaaccttcaccaacgtcact
gaatttgaatatgagatcctggcgaaacgcctgcgtgaactgtcattcctgaactcaggc
gtctccatccgcctgcgcgacaagcgcgatggcaaagaagatcatttccactacgaaggc
ggcatcaaggcgtttgttgaatatctgaacaagaataaaacgccgatccacccgaatatc
ttctatttctccaccgaaaaagacggtatcggcgtggaagtagcgctgcagtggaacgat
ggtttccaggaaaacatctactgctttaccaacaacattccgcagcgcgacggcggtact
caccttgcaggcttccgtgcggcgatgacccgtacgctgaacgcctacatggacaaagaa
ggctacagcaaaaaagccaaagtcagcgccaccggcgacgatgcccgtgaaggtctgatt
gcggtggtttccgtaaaagtaccggatccgaaattctcctcacagaccaaagataagctg
gtctcttccgaggtgaaatcggcggtagaacagcagatgaacgaactgctgagcgaatac
ctgctggaaaacccatctgacgcgaaaatcgtcgtcggcaaaattatcgacgccgcgcgt
gcgcgtgaagcggcgcgtcgcgcccgtgaaatgacccgtcgtaaaggcgcgctcgattta
gccggtctgccgggcaaactggcggactgtcaggaacgcgacccggcgctgtccgaactg
tacctggtggaaggggactccgcgggcggctctgcgaagcaggggcgtaaccgcaagaac
caggcgattctgccgctgaaaggtaaaatccttaacgtcgagaaagcgcgcttcgacaag
atgctttcctcccaggaagtggcgacgctgatcaccgcgctgggctgcggtatcggtcgc
gacgagtacaacccggacaagctgcgctatcacagcatcatcatcatgaccgatgcggac
gtcgacggctcgcacatccgtacgctgctgttgaccttcttctatcgtcagatgccggaa
attgtcgagcgtggccacgtctacattgcgcagccgccgctgtacaaagtgaagaaaggt
aagcaggaacagtacattaaagacgacgaagcgatggatcagtaccagatttccatcgcg
cttgacggtgcgactctgcacgcgaacgctcatgcgccggcgctatccggcgaagcgtta
gaaaaactggtctctgaatataacgccacgcagaaaatgattggtcgtatggagcgtcgc
ttcccgaaagcgctgctcaaagagctggtgtatcagccaactctgaccgaagccgatctt
tctgatgagcagactgtaacgcgctgggtgaatgcgctgattaccgagctgaacgagaaa
gagcagcacggcagtcagtggaagttcgatgttcatactaatacggaacagaatctgttc
gagccgatcgttcgcgtgcgtacgcatggcgtggataccgattatccgttggatcacgag
tttgtgaccggcgcggaatatcgtcgtatctgcacgctgggcgagaagctgcgtggtctg
attgaagaggacgcgtttatcgaacgcggcgagcgtcgccagccggtaaccagcttcgag
caggcgctggagtggctggtgaaagaatcacgtcgcggtctggctatccagcgttataaa
ggtctgggtgaaatgaacccggatcagctgtgggaaaccaccatggacccggaaagccgc
cgtatgctgcgcgtgaccgtcaaagatgcaattgctgccgaccagctgttcactacgctg
atgggtgatgccgttgagccgcgtcgtgcctttatcgaggagaacgccctgaaagcagcg
aatatcgatatttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system