KEGG   Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601: SSPA0093
Entry
SSPA0093          CDS       T00756                                 
Name
(GenBank) probable ATP-dependent helicase HepA
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
sek  Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601
Brite
KEGG Orthology (KO) [BR:sek00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sek03021]
    SSPA0093
Transcription machinery [BR:sek03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     SSPA0093
SSDB
Motif
Pfam: RapA_C Tudor_RapA Tudor_1_RapA Helicase_C SNF2-rel_dom ResIII DEAD AAA_34 Flavi_DEAD
Other DBs
NCBI-ProteinID: CAR58204
UniProt: B5BL33
Position
complement(109932..112838)
AA seq 968 aa
MPFTFGQRWISDTESELGLGTVVAMDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT
ITSHEGWQLHIDEVKEENGLLVYVGTRLDTEETNVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPYSGLRGQRTNLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYTEAQH
DAYNPFETEQLVICSLDFARRNKQRLEHLCDAEWDLLVVDEAHHLVWSTDAPSREYMAIE
QLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQKNYRPVADAVAMLL
AGNKLSNDELNRLGDLIGEQDIEPLLQAANSDRDDAQAARDELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTVKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDSAYASLINYLAAPEET
DGFDDLIKSCREQHEALKAQLEQGRDRLLEIHSNGGEKAQQLAQSIEEQDDDTNLIAFAM
NLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEKSAR
ALIDNARREADEKLSGELSRLEALRAVNPNIRDDELAAIDSNRQQVLESLNQAGWRLDAL
RFIVVTHQ
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgccttttacatttggtcaacgctggatcagcgatacagaaagcgagctgggacttgga
accgttgttgcgatggatgcgcgaaccgtcaccttacttttcccgtccacgggggaaaac
cgcctgtatgcgcgcagtgattctcccgtgacccgcgtcatgttcaaccctggcgatacg
attacaagccatgaaggctggcagctacatatcgatgaagtaaaagaagaaaatggcctg
cttgtttatgtcggcacccgcctggataccgaagagaccaatgtgacgttgcgcgaagtt
ctgctcgacagcaagttggttttcagtaagccccaggatcgtctgttcgccggtcaaatc
gatcgaatggatcggttcgcgctgcgctatcgcgcccgtaaatttcagagcgagcagtac
cggatgccatacagcggtctgcgcggtcagcggaccaatctgatcccgcatcagcttaat
atcgctcatgatgtaggtcgtcgccacgcgccgcgcgtactgctggcggatgaagtgggc
ttaggtaaaaccattgaagccgggatgattctgcatcaacagttattatccggcgcggcg
gaacgcgtattgatcatcgtgccggaaaccctgcaacaccagtggctggtagaaatgctg
cgccgtttcaacctgcgcttcgcgctgttcgatgacgaacgctataccgaagcgcagcac
gacgcgtataacccgtttgaaaccgaacaactggtgatctgctcgctggatttcgcccgc
cgtaataagcagcgtctggaacatttgtgcgacgccgagtgggatttgctggtggtcgac
gaagcgcatcatctggtgtggagcaccgatgcgccgagccgtgaatatatggccatcgaa
cagttagctgaacgcgtaccgggcgtgctactgctgaccgccacgccagaacagctgggg
atggaaagccatttcgcccgtctgcgtctgctcgatccgaaccgtttccacgatttcgaa
cagtttgtcgaagaacagaaaaactaccgccctgtcgccgatgcggtggccatgctgctg
gcgggcaataaactcagcaacgacgaactgaacaggctgggcgatctgatcggcgaacag
gatattgaaccgctgttgcaggccgctaatagcgatcgcgacgacgcgcaggccgcccgt
gatgagctggtgtcgatgctgatggatcgccacggcaccagccgcgttctgttccgcaac
acccgtaacggcgtcaaggggttcccgaaacgtgaactgcatacggtaaaactgccgctg
ccgacccagtatcagaccgccattaaggtctccggcattatgggcgcgcgtaaaagcgcg
gaagatcgcgcccgcgatatgctctatccggaacaaatttatcaggagttcgaaggcgat
accggcacctggtggaacttcgacccacgcgttgagtggctaatgggctatctgaccagc
catcgttcgcaaaaagtgctggtgatctgcgccaaagcgaccaccgcgttacagctggag
caggtgctgcgcgaacgcgaaggcatccgtgccgccgtgttccatgagggcatgtcgatt
atcgaacgcgaccgcgccgccgcctggttcgccgaagaagataccggcgcgcaggtgctg
ttatgttccgaaatcggctccgaaggacgtaacttccagtttgccagcaatctggtgatg
ttcgacttgccgtttaacccggatctgctggaacagcgtattggtcgtctggatcgtatc
ggccaggcgcatgatatccagatccacgtcccgtacctggaaaaaaccgcccagtcggtg
ctggttcgctggtatcacgaagggctggacgcctttgagcacacctgcccgaccggtcgc
gcgatttatgattcagcctacgccagtctgattaactatctggccgcgcctgaagaaacc
gacgggtttgacgatctgatcaaatcctgccgcgagcaacatgaagcgctaaaagcccag
ttagaacagggccgcgaccgcctgctggagatccactccaacggcggagaaaaagcccaa
cagctcgcacaaagcattgaagaacaggacgacgacaccaacctgatcgcgttcgccatg
aacctgttcgatatcgtcggcattaaccaggacgatcgcggcgacaacctgatcgtgctg
acgccgtccgaccacatgttggtgccggatttccccggcctgccggaagacggctgtact
atcacgtttgaacgtgatgtagccctgtctcgcgaagatgcgcagtttattacctgggaa
catccgctcatccgtaacggactggatctgatcctctccggcgataccggcagcagcacc
atttcgctgttgaaaaataaagcgctgcccgtcggcacgctgctggtcgaactggtttac
gtcgtggaagcgcaggcgccgaaacagctacaactgaaccgcttcctgccgccgacgccg
gtacgtatgctgttagataaaaacggcaacaatctggccgcccaggtcgagtttgaaacc
ttcaaccgtcagctcagcgccgtgaatcgccacaccggcagcaaactggttaacgccgta
caacaggacgtccacgccattttgcaactgggcgagacgcagattgaaaagtccgccaga
gcgctgattgataacgcgcgtcgcgaggcggatgaaaaactgtccggggaactgtcgcgt
ctggaagcgctgcgcgccgtcaacccgaacattcgcgacgacgaacttgccgctatcgac
agtaaccgtcagcaggtactggagagcctgaatcaggcaggctggcgtctggacgcgctg
cgttttatcgtcgtcacgcaccaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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