KEGG   Selenomonas sp. oral taxon 478: ADJ74_06385
Entry
ADJ74_06385       CDS       T04017                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
sele  Selenomonas sp. oral taxon 478
Pathway
sele03030  DNA replication
sele03430  Mismatch repair
sele03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sele00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ADJ74_06385
   03430 Mismatch repair
    ADJ74_06385
   03440 Homologous recombination
    ADJ74_06385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sele03032]
    ADJ74_06385
   03400 DNA repair and recombination proteins [BR:sele03400]
    ADJ74_06385
Enzymes [BR:sele01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ADJ74_06385
DNA replication proteins [BR:sele03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ADJ74_06385
DNA repair and recombination proteins [BR:sele03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ADJ74_06385
SSDB
Motif
Pfam: DNA_pol3_alpha PHP DNA_pol3_finger HHH_6 HHH_3 T2SSK DUF655 HHH_5 HHH Auto_anti-p27
Other DBs
NCBI-ProteinID: AKT54091
UniProt: A0A0K1FI74
Position
1:1359137..1362901
AA seq 1254 aa
MKTYRILSCAADLLLRLLHGLALAEEERALLRACVVRHVEVCGDTWEIVVGTQTVMDDAL
IERIAAQVAANYQLSQVLIQQNLVALAPAVAPLWEQIVRDAAAGDAVLYHTLLQADYAVD
GNVIRISAPGAFGAELFAQSSTAGRIEHAVRTHVGCACRVVCEESALSGALPSADWTPPA
VPAAAPTKATPSAALARAAKNTKVKELPANVIMGRGVSGEARTLGVIEDEVKNVVLEGEV
FDPQANQLKSGAYILTIKFADATNGISCKKFFSARGKTTQEEIDAEVERIIKAIGKGGAV
RIQGKIEYDKFISDYVLFIDSMERRSVPQREDTAEEKRVELHAHTKMSALDAVVPPKVLV
ETAARWGWPAVAITDHGVVQAFPEAMNTARALAKKGIDIKIIYGMEGYLVDGEDDARAFH
IIFLAKNKTGLYNLYKLVSLSHIRYFRGTKKRGRPRVPRAVLEQYREGIIVGSACEAGEL
IRGIVAGRPDAELEEMAKFYDFLEIQPIHNNDFLKFDDRFPMQTDEDLRDINRKVDELAR
KLGKPLIATCDVHFLNPEDAVYRAMIQKANGYRDAERQPPLYLRTTEEMLAEFDYLGAER
AYECVVTNPRRIAEETERFLPIPDELYAPMVPGADREIQEMSYARARKLYGENLPKIVSD
RLELELKPILRHGFAALYIIAQRLVKKSNDDGYLVGSRGSVGSSFVATMIGVTEVNPLPP
HYRCPHCQYNRFIDDGSVGSGFDLPSEDCPVCGTPLIKDGHNIPFAVFLGFDGDKVPDID
LNFSGDYQPVAHKYTEVLFGKMNVFRAGTIAGLQDKNAYGYAMHYYEDQGEAKGRPYIEH
MMRGCMGVKATTGQHAGGIMVVPRDMDVHYFTPIQRPANNMESDTLTTHFDYHSISERLV
KLDILGHDDPTVIKMLEELTHRDPETIPFDDPATMSIFTSTDALGITPEDLGANMGTYGI
PEFRTSFTQKMIDDSNPDCFADLVRISGFSHGTNVWLGNAQDLIKAGTSTLKDAISARDD
IMNYLMQNGIEPLLSFKTMENVRKGRGIAPDVVEKLRAGGIPEWYIESCQKIKYLFPRAH
ATAYVMMGYRIAFCKVHYPLAYYAAYFSIRAAEFDANIISKGKDAVRAAIDALLAEAREH
RGKLDNKKQDTLIVLQLAWEMYLRGFSCEPVDLYASDAEKFILHENSLLPPFTAIPGVGQ
KAAQAIVEARRDGRFISVEDLATRAHVPAPAIEVLRTHGCLDGMMESNQVELFA
NT seq 3765 nt   +upstreamnt  +downstreamnt
atgaagacctatcgaatcctttcatgtgcggcagatctcctgctgcgcctgctgcatggg
ctcgccctcgccgaggaggagcgggctcttttgcgtgcctgcgtcgtccgtcatgtcgag
gtatgcggcgatacgtgggagattgtcgtcggaacgcagacggtcatggatgatgctctc
atcgagcgcatcgcggcgcaggtggcggcgaactatcagctctcgcaggtgctcatccag
cagaatctcgtcgcgcttgccccggcggtcgcgccgctctgggagcagatcgtccgcgat
gctgccgcgggcgatgccgtcctctatcatacgctgctgcaggcggactacgctgtggac
ggcaacgtcatccgtatctctgcgcccggtgcattcggcgcagagctctttgcgcagagc
agtacggcaggacgtatcgagcatgccgtgcgcacgcatgtcggctgcgcctgccgcgtc
gtctgcgaggagtctgcgctcagtggtgcactccccagcgcagactggacaccgcccgcc
gtgcctgccgctgcaccaaccaaggcgacaccatccgccgcactggcgcgtgcggcgaag
aacaccaaggtgaaggagctccctgccaatgtcattatggggcgcggcgtctcgggcgag
gcacgcacgttgggcgtgatcgaggacgaggtcaagaacgtcgtcctcgagggcgaggtc
tttgacccgcaggcgaaccagctgaagtccggtgcctatatcctcaccatcaaatttgcc
gatgcgacgaacggaatcagctgcaagaagtttttctccgcgcgcggcaagacgacgcag
gaggagattgacgccgaggtcgaacgcatcatcaaggcgatcggcaagggcggtgcggtg
cgcatccaagggaaaatcgaatacgataaattcatcagcgactatgtgctcttcatcgac
agcatggagcggcgcagcgtcccgcagcgcgaggatacagcggaggaaaaacgcgttgag
ctgcacgcgcatacgaagatgagcgcgctcgatgccgtcgtcccgcccaaggtgctcgtc
gagacggcggcgcgttggggttggccggcggtcgccatcaccgaccacggcgtcgtgcag
gcattccccgaggcgatgaatacggcgcgcgccctcgcgaagaagggcatcgacatcaag
atcatctatggcatggagggctatctcgtcgacggagaggacgacgcccgtgcctttcac
atcatctttttggcgaaaaataagacggggctctataacctctataagctcgtctcgctc
tcgcatattcgctacttccgcgggacaaagaagcgcggtcggccgcgtgtgccgcgtgcc
gtcctagagcagtaccgcgaggggatcatcgtcggctctgcctgcgaggcgggcgagctg
atccgcggcatcgtcgccgggcgtcccgatgcggagctggaggagatggcgaagttctac
gacttcctcgagatccagcccattcacaacaatgactttttgaaatttgacgaccgcttt
cccatgcagacggacgaggatctcagggacatcaaccgcaaggtggacgagctggcacgc
aaactcggcaagccgctgatcgcgacctgcgatgtgcatttcctcaatcccgaggatgcc
gtctaccgcgccatgatccaaaaggcgaatggctaccgtgacgccgagcgtcagccgccg
ctctatctgcgcacgacggaggagatgctcgcggagttcgactatctcggtgcggagcgc
gcctacgagtgcgtcgtaacgaatccgcgccgcatcgcggaggagacggagcgctttctc
ccaatccccgatgagctctatgcgccgatggtaccgggcgcagatcgcgagattcaggag
atgtcctacgcacgcgcgcgaaaactctacggcgagaatctgccgaagatcgtctccgac
cgtctcgagctcgagctgaagccgatcctgcggcatggatttgccgcgctctacatcatc
gcccagcgcctcgtgaaaaaatccaacgatgacggctatctcgtcggctcgcgcggatcg
gtcggctcctcctttgtcgcgacgatgatcggcgtcaccgaggtcaacccgctgccgccg
cactatcgctgcccgcactgtcagtacaatcggttcatcgacgatggctcggttgggagc
ggatttgatctgccgtccgaggactgtcccgtctgcggcacgccgctcatcaaggacgga
cataacatcccgttcgccgtattcctcggttttgacggggacaaggtgcccgatatcgat
ctgaacttttcgggcgactatcagcccgtcgcacacaagtacacggaagtcctcttcggc
aagatgaatgtgttccgtgcgggcacgatcgcaggcctgcaggacaagaatgcctacggc
tacgccatgcactactacgaggatcagggcgaggcaaaggggcgcccctacatcgagcac
atgatgcgtggctgcatgggggtcaaagcgacgacgggacagcacgcgggcggcatcatg
gtcgtgccgcgcgacatggacgtgcactacttcacgcctatccagcgccctgcgaacaat
atggagtcggatacactcacgacccatttcgattaccattccatcagtgagcgtctcgtc
aagctcgatattctcggacacgatgatccgacggtcatcaagatgctggaggagctgacg
caccgcgaccccgagaccatcccgtttgacgatcccgcgaccatgtccatcttcacctcg
accgacgcgctcggcatcacgcccgaggatctcggggcgaatatggggacgtacggcatc
ccggagttccgcacgtcatttacgcagaagatgatcgacgactcgaaccctgactgtttt
gccgatctcgtgcggatctcgggcttttcccatgggacgaacgtctggctcggcaacgca
caggatctcatcaaggcgggcacgagtacgctgaaggacgcgatctccgcgcgtgacgac
atcatgaactacctcatgcagaacggcatcgagccgctgctctcgttcaagaccatggag
aatgtgcgaaagggcagaggtatcgcgcccgatgtcgtggagaaactgcgcgcgggcggg
atccccgagtggtatatcgagtcctgccagaagatcaaatacctctttccgcgcgcccat
gcgaccgcgtatgtcatgatgggctaccgtattgcgttctgcaaggtgcactatccactc
gcatactacgccgcctacttctccatccgcgccgcagagttcgatgcaaacatcatctcg
aagggcaaggatgccgtgcgtgcggcaatcgacgcgctcctcgctgaggcgcgtgagcac
cgcggcaagctggacaacaagaagcaggacacgctcattgtcctgcagctcgcatgggag
atgtacctgcgcggcttctcctgtgagcccgtcgatctctacgcctccgatgcggagaaa
ttcatcctgcatgaaaactcccttttgccgccctttacggcgatcccgggcgtgggacag
aaggcggcgcaggcgattgtcgaggcgcggcgggatggacgcttcatctccgtcgaggat
ctcgcgacgcgcgcccatgtgcccgcgcctgccatcgaggtgctgcgtacacacggctgc
ctcgacggcatgatggagagtaatcaggttgagctgtttgcgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (23)   

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