KEGG   Selenomonas sp. oral taxon 478: ADJ74_07295
Entry
ADJ74_07295       CDS       T04017                                 
Name
(GenBank) RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
sele  Selenomonas sp. oral taxon 478
Pathway
sele03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sele00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ADJ74_07295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sele03019]
    ADJ74_07295
   03009 Ribosome biogenesis [BR:sele03009]
    ADJ74_07295
Messenger RNA biogenesis [BR:sele03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ADJ74_07295
Ribosome biogenesis [BR:sele03009]
 Prokaryotic type
  rRNA helicases
   ADJ74_07295
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Flagellin_IN SecA_DEAD
Other DBs
NCBI-ProteinID: AKT54258
UniProt: A0A0K1FI81
Position
1:1559895..1561160
AA seq 421 aa
MTHFDQLGISETLTALLQKQGITQPTPVQEQAIPPMRAGRDVIAQAQTGTGKTLAYLLPL
LARIKPQGAAAQALVIAPTRELAIQIERVAEPLAQPLGIGTVVIYGGADIERQKEKLRRS
PQLVIGTPGRLLDHVRRGTLALGSVNKVVLDEADEMLKMGFIEDVETLLGAAAQDYQLAL
FSATMPERIVRLTKRFMTNPAHIRLAGETVTLAAIEQVVIPVSAGDKLDRLCASINEEAP
YLAMVFCATKERTRALMMELAQRGYLVDALSGDLTQTQRSFVLRQFRSAKLQILCATDIA
ARGLDIEGVTHVYNYDLPPTVTDYIHRIGRTGRAGTQGKAITLVAPHQHEKLRKMEAALK
ERLRRDAVKKKPRPTETTEMQQRVQRGERKRTTPKKIKPRPRSKKSGKTVTNLGHRSRRK
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgacgcatttcgatcagctcggcatctcggagacgctgaccgcactcctccaaaaacag
ggcatcacgcagccgacccccgtgcaggagcaggcgatcccgcccatgcgcgcggggcgt
gacgtgatcgcacaggcgcagacggggacgggcaagacactcgcctatctcctgccgctc
cttgcgcgcatcaagccgcagggcgcggcggcacaggcactcgtcatcgcaccgacgcgt
gagctcgccatccagatcgagcgcgtcgccgaaccgctcgcccagccccttggtattggc
accgtcgtgatctatggcggggcggatatcgagcggcagaaggaaaagctgcgccgcagt
ccgcagctcgtcatcggtacgccgggacgtctgctcgatcacgtacggcgcggaacgctt
gcgctcggcagtgtgaacaaggtcgtcctcgacgaggcggacgagatgctgaagatgggc
ttcatcgaggatgtggagaccctgctcggtgctgcggcacaggactatcagctcgcactc
ttctcggcaacgatgcccgagcgcattgtgcgcctgaccaagcggttcatgactaacccc
gcgcacattcgtctcgcgggcgagaccgtgacactcgccgccatcgaacaggtcgtcata
cccgtcagtgcaggggacaagctcgaccgcctctgtgcctccatcaacgaggaggcaccc
tacctagcaatggtgttctgcgccacgaaggagcgcactcgtgcgctcatgatggagctc
gcacagcgtggctatctcgtcgatgcgctcagcggcgacctcacgcagacgcagcgcagt
ttcgtcctgcgccagttccgcagtgcaaaactgcagatcctctgcgcgacggacattgcg
gcgcgcggactcgacatcgagggcgtgacccacgtctataactacgacctgccgccgacc
gtgacagactacatccaccgcatcggccgcacggggcgcgcagggacacagggcaaggcg
atcacactcgttgcgccgcatcagcacgaaaaactccgcaagatggaagctgcactcaaa
gagcggctgcgtcgtgacgcagtgaaaaagaaaccgcgtccgacggagacgaccgagatg
cagcaacgggtgcagcgcggtgagcggaagcggacaacgccgaaaaaaataaagcccagg
ccgcgcagcaaaaagtccggcaagactgttacaaatcttggacatcgcagccgcaggaag
cggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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