KEGG   Selenomonas sp. oral taxon 136: AXE86_10595
Entry
AXE86_10595       CDS       T04745                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
selo  Selenomonas sp. oral taxon 136
Pathway
selo03410  Base excision repair
selo03430  Mismatch repair
selo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:selo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AXE86_10595
   03430 Mismatch repair
    AXE86_10595
   03440 Homologous recombination
    AXE86_10595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:selo03400]
    AXE86_10595
DNA repair and recombination proteins [BR:selo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     AXE86_10595
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AXE86_10595
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AXE86_10595
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 ssDNA-exonuc_C
Other DBs
NCBI-ProteinID: AME04484
UniProt: A0A0X8KCB7
Position
2202259..2204274
AA seq 671 aa
MRWEEEEKNVLKEWIVAQHTDEGDALAAEIGVTPIIGQLLWQRGIRTAEEARAFLHPADT
PFHDPFLMADMERGAERVLSAVRRDEPIVIYGDYDVDGMTATALLMRSIRTLGGNVSYYI
PNRFTEGYGLNADALQQIAGEGCRLLVTVDCGIASVDTVAEAAGGMDIVITDHHLPGQML
PPAYAVMNPHRADCAYPEKNLAGVGVAFKLVQALWQMERKESFAEYLDIAALGTVADLVP
LVGENRKIVQMGLRQMAEHPCVGIRALIEVAGLADKSINTGQVGFQLAPRLNAAGRLETA
RHGAELLLTEDTACASRMAGELNALNTERRNLEQDILAEAERQLADFTPDVPAIVVAGEE
WNAGVIGIVASRLVEKYYRPSIVLTRRGDVYKGSCRSIAGLHLYEALSACRDTLIQFGGH
AMAAGLTLSCERLSDFRRAFSEAVRTRLTAQDFIPKVAVSALAAPADWTVETVEELALLE
PYGMGNPRPIFGVRNVRPQKASSIGAEGKHLRMDVGTREHHITALYWNAGDLATVLTEED
SDLAYTPSINEWQGERSVQCMVDTVTPAAHERIFPERELLRRIYAFLRSLAAEDGTIRGS
APVLTHRFSYTMEHISHYTMDCALQIFLELGVLNVSPEGWNFVPPRGTMELMDAPTYRQH
RERKEATKNVG
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgaggtgggaagaggaggagaaaaacgtgctgaaagaatggatcgtcgcacagcatacg
gacgagggggacgcgctcgccgcagagatcggcgttacgcccatcatcggacagctcctc
tggcagcgcggcatccgcacggcagaggaagcgcgcgcctttctccaccccgcggatacg
ccgtttcatgatccctttctcatggcggatatggagcgcggggcagagcgcgtcctgtct
gccgtccgccgtgacgagccgatcgtgatctacggggactacgacgtggacggcatgacg
gcaaccgccctcctgatgcggagtatccgcactcttggcggcaatgtctcctactatatc
ccgaaccgtttcacggagggctatgggctgaacgccgatgccctgcagcagatcgcgggg
gagggctgtcgccttcttgtgacggtggactgcggcattgcctcagtggatactgtggca
gaggcggcgggcggcatggacatcgtcatcacggatcatcatctgccggggcagatgctc
ccgcctgcctatgccgtgatgaacccgcatcgtgcagactgcgcctatccggagaagaat
ctcgcaggtgttggtgtcgcgtttaagctcgttcaggcactttggcagatggagagaaag
gagtcttttgcagagtatctggacatcgcggcactcggcacggtcgccgatcttgtgccg
ctcgtcggcgagaaccgaaaaattgtgcagatgggactgcggcagatggcagagcaccct
tgtgtcggcatccgcgccctcatcgaggtcgcggggcttgcggacaagagcatcaatacg
ggacaggtcggattccagcttgccccgcgtctcaatgcggcaggccgtcttgagacagca
cgtcatggggcagagctccttctaaccgaggatacggcgtgtgcctcccgcatggcagga
gagctgaatgcactcaatacggagcggcgtaatctggagcaggacatcttggcggaggcg
gagcggcagctggcggatttcactcccgatgttcctgccatcgtcgtggcaggagaggaa
tggaacgcaggcgtaatcggcatcgtggcatctcgcctggtcgaaaaatattatcgaccg
agcattgtcctcacgcgtcggggcgatgtctataagggctcatgccgcagcatcgcggga
ctgcatctctacgaggcactttccgcctgtcgtgacaccctcatccagttcggcggacat
gctatggcggcaggactgacactctcctgtgaacgtctctcggactttcgccgtgccttt
tcggaggcggtgcgcaccagactgaccgcgcaggactttatcccgaaggtcgccgtttcg
gctcttgccgctcccgcggactggaccgtcgagacagtggaggagctggctctgctggag
ccgtatgggatgggaaatccgcgcccgatcttcggcgtgcggaacgtccgtccgcagaag
gcatcgtccatcggtgcggagggaaagcatctgcgcatggacgtcggcacgcgggagcat
cacatcacggcactttactggaatgcgggcgatctcgcgacagtgctgacggaggaggac
agcgacctcgcctatacgccgagcatcaacgagtggcagggcgaacgctccgtgcagtgc
atggtggatacggtcacgcccgccgcacacgaacgcatctttccggagcgggaactgctt
cgcaggatctatgccttcctgcgttctcttgcggcggaggatgggacgatacgagggagt
gcacctgtgcttacccaccgcttttcatatacgatggaacatatctcacattacacgatg
gactgcgccctgcagatctttttggagctcggcgtgctgaatgtatcgcctgaggggtgg
aattttgttccgccgcggggtacaatggagctgatggatgcgccgacctatcgtcagcat
cgggagagaaaggaggcgacaaaaaatgtcggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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