KEGG   Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C01440
Entry
STMDT12_C01440    CDS       T01742                                 
Name
(GenBank) hypothetical protein
  KO
K02504  protein transport protein HofB
Organism
sem  Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:sem00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sem02044]
    STMDT12_C01440
Secretion system [BR:sem02044]
 Type II secretion system
  Type IVa pilus homolog protein
   STMDT12_C01440
SSDB
Motif
Pfam: T2SSE MshEN AAA_16 AAA_30 AAA_22 AAA_11 AAA_7 AAA_29 ResIII AAA_14 DEAD BAGE Sigma54_activ_2 Kinesin nSTAND3 AAA_19 AAA_23 cobW
Other DBs
NCBI-ProteinID: BAJ35087
NITE: STMDT12_C01440
Position
complement(166319..167704)
AA seq 461 aa
MKDAQLNTLCQRHQAVLINSASNSITVAVVDAPSHALLDALHFATQKQIDIVCWTRQQME
NHRHKPDQAPSANAAKGGETAAQLLNQTLRSAMAKRASDIHLEPGASRYRIRLRIDGVLH
ILQDIAKETGLALTARLKVLGNLDIAEHRLPQDGQFTVDLAGDSISFRIATLPCKEGEKV
VLRLLHQVEQTLDLDTLGMYGAQLTAFRQALQQPQGLVLVTGPTGSGKTVTLYSALQTRN
TPGINLCSVEDPIEIPLDGINQTQIHPRAGLTFQNVLRALLRQDPDIIMVGEIRDGDTAE
IAIKAAQTGHLVLSTLHTNSTSETLIRLQQMGVARWMISSALTLVVAQRLVRKLCPHCKQ
RLSDPVVLSPNLWPSAIPRWQASGCQHCYHGFYGRTALFEVLTVTPALRQLIASGASAQA
LEAHLQQTGTGTLFENGCRAVEQGMTSFEEILRVLGMPHER
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgaaagacgctcagctcaacaccttgtgtcaacgtcatcaggctgtactgatcaatagc
gccagcaacagtatcactgttgcggtggtcgacgcgccctctcatgcgttactggacgct
ctgcatttcgccacgcaaaaacagattgatattgtgtgctggactcgccagcaaatggaa
aatcatcggcataagccggatcaggcaccctcggcaaacgccgcgaaaggcggagaaacc
gcagcccagcttctcaatcagacattacgctcggcgatggcgaaacgcgcctctgatatc
catctcgaacccggcgccagccgctaccgaataagactccgcatcgacggcgttcttcat
attctgcaggacatcgccaaagagacggggcttgcgctgacggccagattgaaagtcctg
ggaaatttggacatcgctgaacatcgactgccgcaggacgggcaatttaccgttgacctg
gcgggcgacagcatctcttttcgtatcgccacgcttccctgtaaagaaggcgaaaaagtc
gtcttacggttgttgcatcaggttgaacaaacgctggatctggacacgctgggcatgtac
ggggcacaacttaccgcttttagacaagccctacagcaacctcaggggctggtactggtg
actggccccaccggtagcggaaaaacggtcacgctatacagcgcgctacaaacccggaat
acgccgggtatcaacctctgtagcgttgaggatccgatagaaattccactggatgggatt
aaccagacgcagatccatccccgcgccgggctcacctttcaaaatgtgctgcgcgcgctt
ttacgccaggaccctgacatcatcatggtaggtgaaattcgtgacggcgacaccgcagaa
atcgccattaaggcggcacaaacgggccatctggtactttcaacgctccatacgaactcc
accagcgaaaccctgatacgtttgcagcaaatgggcgtagcacgctggatgatctcatcg
gcgcttacgctggtggtagcgcaacgcctggtaaggaagctttgcccgcactgcaaacag
cgtctgagcgatcccgtggtgctatcgcccaatctttggcccagcgcgataccgcgctgg
caggcaagcggctgtcagcattgctaccacggcttttatggccgaaccgcgttattcgaa
gtgttaaccgttaccccggcattacgtcagttaattgcgagcggcgcatcggcgcaagca
ctggaagcccacctccaacagaccggtacagggacgctttttgaaaatggctgtcgcgcc
gttgagcaaggcatgacgtcctttgaagagatactgcgcgttctgggaatgccccatgag
cgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (25)   

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