KEGG T00492: SACE

Saccharopolyspora erythraea: SACE_1832

Entry

SACE_1832         CDS       T00492

Name

(GenBank) putative ribonuclease D (partial match)

K03684

ribonuclease D [EC:3.1.13.5]

Organism

sen Saccharopolyspora erythraea

Brite

KEGG Orthology (KO) [BR:sen00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sen03016]
    SACE_1832
Enzymes [BR:sen01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     SACE_1832
Transfer RNA biogenesis [BR:sen03016]
Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SACE_1832

SSDB

Motif

Pfam:

DNA_pol_A_exo1 DNA_pol_A_exoN HRDC

Other DBs

NCBI-ProteinID:

Kitasato:

Cambridge:

UniProt:

Position

complement(2014081..2015340)

AA seq 419 aa
MAVEAATPESTGPGRPEPVLLTEPADGVPPVVDSPVALQAAATALAAGTGPVAVDTERAS
GYRYSQRAYLVQLRREGAGTVLVDPIALAGSLEPLATALDDTEWVLHAASQDLPCLAELD
LRPARLFDTELAGRLAGFDRVSLGALVERMLGYRLEKGHSAADWSRRPLPADWLAYAALD
VELLVALREAMHAELERQDKLEWAWEEFEAVRAAPPAPPRAEPWRRTSGIHRVRSPRQLA
AVRALWEARDAVARERDIAPGRILPDSSIVQAAQANPKTEAELTALPVFGGRQQRRRASM
WLHALRNARRLSADELPVASPPNDGPPPPNRWADRDPAAAARLTAARAKLSELAEKHQLP
AENLLLPDLVRRTCWAPPEDIGEEAVARLLREKGAREWQIALTANALSTALHAEPAATE

NT seq 1260 nt +upstreamnt +downstreamnt
atggccgtggaagctgcaactcccgagtccaccggacccggccgcccggaaccggtgctg
ctgaccgagccggccgacggcgtaccgccggtggtcgactcccccgtcgcgctgcaagcc
gccgctaccgcgctcgccgcgggaaccggcccggtggcggtcgacaccgagcgagcctcg
ggttaccgctactcgcagcgcgcctacctggtgcaactgcgccgggagggcgcgggcacg
gtgctggtcgatccgatcgcgctggcgggctcgctggaacccctggccaccgcgttggac
gacaccgagtgggtgctgcacgcggcgtcgcaggacctgccgtgcctggccgagctggat
ctgcggcccgcgcggctgttcgacaccgaactggccggccgtctcgccgggttcgaccgg
gtctcgctcggcgcactcgtcgagcgcatgctcggctaccggctcgagaagggccacagc
gcggccgactggtcgcgccgtccgctgcccgcggactggctcgcctacgccgcgctcgac
gtcgagttgctggtcgccctgcgcgaggcgatgcacgccgagctggagcgccaggacaag
ctcgagtgggcgtgggaggagttcgaagccgtacgcgccgccccgcccgcgccgccgcgc
gccgaaccgtggcgccgcacgtccggcatccaccgggtgcgcagcccccgccagctcgcg
gcggtccgcgcgctgtgggaggcgcgtgacgcggtcgcccgcgaacgcgacatcgcgccg
gggcgcatcctgcccgacagctcgatagtgcaggccgcgcaggcgaatccgaagacggag
gcggagctgaccgcgctgccggtcttcggcggcaggcagcaacggcgccgcgcctcgatg
tggctgcacgccctgcgcaacgcgcgtcggctgtcggccgacgagcttccggtggcctcg
ccgcccaacgacggtccgccaccgcccaaccggtgggccgaccgcgatccggccgccgcg
gcccggcttaccgcggcccgcgcgaagctctccgagctcgccgagaagcaccagttgccc
gcggagaacctgctgctgcccgatctcgtccgccgcacctgctgggcgccgccggaggac
atcggcgaggaagccgtcgcgcgactgctgcgcgagaagggcgcccgcgagtggcagatc
gcgctgaccgcgaacgccctcagcaccgcactgcacgccgaaccggccgcgacggagtag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   CAMBRIDGE (1)   
   KITASATO (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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