KEGG   Saccharopolyspora erythraea: SACE_6142
Entry
SACE_6142         CDS       T00492                                 
Name
(GenBank) histone-like DNA binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sen  Saccharopolyspora erythraea
Brite
KEGG Orthology (KO) [BR:sen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sen03032]
    SACE_6142
   03036 Chromosome and associated proteins [BR:sen03036]
    SACE_6142
   03400 DNA repair and recombination proteins [BR:sen03400]
    SACE_6142
DNA replication proteins [BR:sen03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SACE_6142
Chromosome and associated proteins [BR:sen03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SACE_6142
DNA repair and recombination proteins [BR:sen03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SACE_6142
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: CAM05315
Kitasato: SACE_6142
Cambridge: SACE_6142
UniProt: A4FMP0
Position
complement(6887563..6888210)
AA seq 215 aa
MNKAQLIEALAERLGDKKTASKAVEDVVDIIVRQVNKGEKVNITGFGVFEKRARAARTAR
NPRTGEAVKVKKTNVPAFRAGTQFKEVIGGTRKLPRLSSAKSGTRASTTKAAGTRAAAAK
TSTTRATASKSAATKTAGTRATKSTTAKAGTTKARTTTKAATTSRSTASKAAPKKATTAK
AAPKTAAKSTAKSSTAKTTRPATRKSTTTRKTTKK
NT seq 648 nt   +upstreamnt  +downstreamnt
gtgaacaaggcccaactcattgaggctctggcggaacgcctcggagacaagaagaccgcg
agcaaggcggtggaggacgtggtggacatcatcgtccgccaggtcaacaagggcgaaaag
gtcaacatcaccggcttcggtgttttcgagaagcgcgcccgcgccgcccgcacggctcgc
aacccgcgcaccggcgaggccgtcaaggtgaagaagaccaacgtccccgccttccgcgcg
ggcacccagttcaaggaagtcatcggcggcacccgcaaactgccgcgcctgagctcggcg
aagtcgggcacccgggcctcgaccacgaaggccgcgggcacccgtgccgccgccgcgaag
acctccacgacccgtgccaccgcgtcgaagtccgccgccaccaagacggcgggcacccgc
gccaccaagtcgaccaccgccaaggccggcacgaccaaggcgcggaccaccaccaaggcc
gccaccaccagcaggtcgaccgcctccaaggcggcgccgaagaaggcgaccaccgccaag
gcggccccgaagaccgcggccaagagcacggccaagtcgtcgaccgccaagacgacgcgt
ccggcgacccggaagtcgaccacgacgcgcaagaccaccaagaagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   CAMBRIDGE (1)   
   KITASATO (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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