KEGG   Salmonella enterica subsp. enterica serovar Enteritidis EC20090135: AU38_06110
Entry
AU38_06110        CDS       T03731                                 
Symbol
yebU
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
  KO
K11392  16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
Organism
sena  Salmonella enterica subsp. enterica serovar Enteritidis EC20090135
Brite
KEGG Orthology (KO) [BR:sena00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sena03009]
    AU38_06110 (yebU)
Enzymes [BR:sena01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     AU38_06110 (yebU)
Ribosome biogenesis [BR:sena03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    AU38_06110 (yebU)
SSDB
Motif
Pfam: Methyltr_RsmB-F YebU_pre-PUA_dom Methyltr_RsmF_N Methyltranf_PUA Methyltransf_31 FtsJ
Other DBs
NCBI-ProteinID: AHP69168
Position
complement(1265765..1267204)
AA seq 479 aa
MAQHAVYFPDAFLTQMREAMPSTLSFDEFISACQRPLRRSIRINTLKISVADFLALIAPY
GWSLTPIPWCHEGFWIERDDEEALPLGSTAEHLSGLFYIQEASSMLPVAALFADDNHPQR
VMDMAAAPGSKTTQIAARMGNRGAILANEFSASRVKVLHANISRCGIANTALTHFDGRVF
GAALPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNLDIAATQRELLNSAFHALRPGG
TLVYSTCTLNRQENEEVCLWLKETYADAVEFLPLGDLFPDADRALTPEGFLHVFPQIYDC
EGFFVARLRKMSSLPAMPAPGYKVGAFPFTPLKGREALHVTQAANAVGLLWDENLHLWQR
EKEVWLFPAEIESLIGKVRFSRLGIKLAESHNKGYRWQHEATIALACPTHAHAFELSVQE
AEEWYRGRDIYPQTPPAADDVLVTFQHQPLGLAKRIGARIKNSYPRELVRDGKLFTGNS
NT seq 1440 nt   +upstreamnt  +downstreamnt
gtggctcaacacgctgtctattttcctgacgcttttctgacgcaaatgcgtgaagcaatg
ccttccacgctctcttttgatgaatttatttcggcctgccaacgcccgttgcgccgcagt
atacgcatcaatacgcttaaaatatccgtggctgatttccttgccctaatcgcgccctac
ggctggtcgctcacgccaattccgtggtgtcatgaaggattctggatcgagcgcgatgat
gaagaggcattgccgcttggcagtaccgctgagcatttaagcggcctgttttacattcag
gaggccagttcgatgctgccggtcgcggccctgttcgccgatgataatcatccgcagcgg
gtcatggatatggcagcggcgcctggctccaaaaccacgcagatcgctgcccgcatgggg
aaccgcggcgccattctggccaacgaattttcggccagccgcgtcaaagttctgcacgct
aatatcagccgatgtggaatcgccaataccgcactgacgcatttcgatggccgcgtattt
ggcgctgcgttaccggagatgtttgacgctatcctgctggatgcgccctgctctggcgaa
ggcgtagtacgtaaagatcctgatgcgctaaaaaactggtcgccagaaagcaatctggat
atcgcggcgacacagcgggaactgctcaacagcgcttttcatgctttacgacccggcggc
acgctggtctactccacctgcacgttaaatcgccaggaaaacgaagaggtctgcctctgg
ctgaaagagacctacgccgacgccgttgaatttttgccgctgggtgatctgtttcctgac
gctgaccgtgccctcaccccggaaggcttcctgcacgtcttcccgcaaatttacgactgc
gaaggattcttcgtcgcacgtctgcgtaaaatgtcatcccttccagccatgcccgcgccg
gggtataaagtgggggcgtttccttttacccccctcaaaggccgcgaagcattacacgtt
acccaggcggccaacgccgtcggactgttatgggatgaaaatctccatctttggcagcgt
gaaaaagaggtctggctgttcccggcagaaattgaatcactgatcggaaaagtccgtttt
tcccggctcggcattaagctggccgaaagtcataataaaggctatcgctggcaacatgag
gcgacgatagcccttgcctgcccgactcatgctcacgcgttcgaactttctgtgcaagag
gcggaggagtggtatcgcggtcgggatatttatccgcaaacaccccctgccgctgatgat
gtcctggtgacgttccagcatcagccacttggtctggcaaaacgtatcggcgccagaata
aagaacagttacccgcgtgaactggtacgtgatggcaaactctttactggtaatagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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