KEGG   Salmonella enterica subsp. enterica serovar Thompson: IA1_05525
Entry
IA1_05525         CDS       T02868                                 
Symbol
putA
Name
(GenBank) bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
sene  Salmonella enterica subsp. enterica serovar Thompson
Pathway
sene00250  Alanine, aspartate and glutamate metabolism
sene00330  Arginine and proline metabolism
sene01100  Metabolic pathways
sene01110  Biosynthesis of secondary metabolites
Module
sene_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:sene00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    IA1_05525 (putA)
   00330 Arginine and proline metabolism
    IA1_05525 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sene03000]
    IA1_05525 (putA)
Enzymes [BR:sene01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     IA1_05525 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     IA1_05525 (putA)
Transcription factors [BR:sene03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    IA1_05525 (putA)
SSDB
Motif
Pfam: Pro_dh Aldedh Pro_dh-DNA_bdg PutA_1st PRODH
Other DBs
NCBI-ProteinID: AGX13073
Position
complement(1173998..1177960)
AA seq 1320 aa
MGTTTMGVKLDDATRERIKMAASRIDRTPHWLIKQAIFSYLDKVENSDTLPELPALFAGA
ANESEEPVAPQDEPHQPFLEFAEQILPQSVSRAAITAAWRRPETDAVSMLMEQARLSPPV
AEQAHKLAYQLAEKLRNQKSASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKAT
RDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGRLVSTHNEANLSRSLNRIIGKSG
EPLIRKGVDMAMRLMGEQFVTGETIAQALANARKLEEKGFRYSYDMLGEAALTAADAQAY
MVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLA
RQYDIGLNIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLVEL
ASRSRRRLMIRLVKGAYWDSEIKRAQMEGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLI
YPQFATHNAHTLAAIYHLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIY
APVGTHETLLAYLVRRLLENGANTSFVNRIADATLPLDELVADPVEAVEKLAQQEGQAGI
PHPKIPLPRDLYGEGRINSAGLDLANEHRLASLSSALLSNAMQKWQAKPVLEQPVADGEM
TPVINPAEPKDIVGWGREATESEVEQALQNAVNQAPVWFATPPQERAAILQRAAVLMEDQ
MQQLIGLLVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFDNETHRPLGPVVCISPWNF
PLAIFTGQIAAALAAGNSVLAKPAEQTSLIAAQGIAILLEAGVPPGVVQLLPGRGETVGA
QLTADTRVRGVMFTGSTEVATLLQRNIATRLDAQGRPIPLIAETGGMNAMIVDSSALTEQ
VVVDVLASAFDSAGQRCSALRVLCLQDDIAEHTLKMLRGAMAECRMGNPGRLTTDIGPVI
DSEAKANIERHIQTMRAKGRPVFQAARENSDDAQEWQTGTFVMPTLIELENFAELEKEVF
GPVLHVVRYNRNQLAELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVG
AVVGVQPFGGEGLSGTGPKAGGPLYLYRLLAHRPPNALNTTLTRQDARYPVDAQLKTTLL
APLTALTQWAADRPALQTLCRQFADLAQAGTQRLLPGPTGERNTWTLLPRERVLCLADDE
QDALTQLAAVLAVGSQALWSDDAFHRDLAKRLPAAVAARVQFAKAETLMAQPFDAVIFHG
DSDKLRTVCEAVAAREGAIVSVQGFARGESNMLLERLYIERSLSVNTAAAGGNASLMTIG
NT seq 3963 nt   +upstreamnt  +downstreamnt
atgggaaccaccacgatgggggttaagctggacgacgccacgcgcgaacggatcaaaatg
gccgcgtcgcgtatcgatcgcacgccgcactggttaataaaacaggcaatctttagctat
ctggacaaggtggaaaatagcgatacgctaccggagctacctgcgctgtttgccggcgcg
gcaaatgaaagcgaggagccggtcgcgccgcaggatgagccgcatcagccctttctggag
tttgccgaacagattcttccccaatccgtctctcgcgccgccatcaccgccgcctggcgc
cgcccggaaaccgatgcagtgtcaatgctaatggaacaggcgcgcctgtcgccgcctgtc
gctgagcaggcgcataaactggcgtatcaactggcggagaaattgcgcaatcaaaaatcc
gccagcggtcgcgcgggtatggtgcaaggcctgttgcaggagttttccctctcttcgcaa
gaaggcgttgcgctgatgtgtctggcggaagcgctgctgcgtattcccgacaaagctacg
cgcgatgcgttaattcgcgacaaaatcagtaatggcaactggcagtcgcatattggccgt
agcccgtcgctgtttgtaaacgccgctacctgggggctgctctttaccggccgactggtc
tcaacgcataacgaagccaatctttcgcgctcgctgaaccgcattatcggcaagagcggc
gaaccgttaatccgcaaaggcgtcgacatggcgatgcgtttaatgggcgagcagttcgtg
actggcgaaaccattgctcaagcgctggcgaatgcccgaaaactggaagagaaagggttc
cgctattcttacgatatgctgggcgaagccgcgttaaccgccgccgatgcgcaggcctat
atggtctcttaccagcaagcgattcatgccatcggcaaagcgtctaacggtcgcggtatt
tacgaagggccaggcatctcgattaagctgtccgccctgcatccacgctatagtcgcgcg
caatacgatcgggtaatggaggagctttatccgcgcctgaaatcactgacgctgctggcg
cgccagtatgatatcggtctcaatatcgacgccgaagaggcggatcgtctggagatctcg
ctcgatctgctggaaaaactctgcttcgaacccgaactggcgggctggaacggcattggc
tttgtgatccaggcttaccagaaacgctgtccgctggtcattgattatttagtcgaactg
gcctcccgtagccgccggcggctgatgattcgtctggtgaaaggcgcctactgggatagc
gaaatcaaacgcgcgcaaatggaagggctggagggctatccggtttatactcgcaaagtg
tataccgatgtctcttatctggcctgcgcgaaaaaactgctcgccgtccctaatctgatc
tacccgcagttcgcgacccataacgctcacacactggcggcgatttatcatctggccggg
caaaattactatccgggtcagtacgaattccagtgcctgcacggcatgggcgaaccgctg
tatgaacaggtcaccggtaaagtggcggacggaaaacttaaccgtccctgccgtatttac
gcgccggtgggaacacacgaaaccctgctggcctatctggtacgacgcctgctggaaaac
ggcgccaacacctcttttgtcaaccgtatcgccgatgccaccctaccgctcgatgaactg
gtggcggacccggtcgaggccgtggaaaaactggcgcagcaggaaggtcaggctggcata
ccgcatccgaaaattccgctgccgcgcgatctgtacggcgaaggtcggataaactccgcc
ggacttgatttagcgaatgaacatcgcctcgcctcgctttcttctgccctgttaagcaac
gccatgcagaaatggcaggccaaacctgtgctggaacaaccggtggccgacggtgagatg
acgccggttatcaacccggcggaaccgaaagatattgttggctggggacgcgaagcgaca
gaaagcgaggttgaacaggcattgcaaaacgcggtcaatcaggcgccggtttggtttgcg
acgccgccgcaagaacgcgccgctattttgcagcgggcggcggtattaatggaagaccaa
atgcagcagttgattggcctgttggtgcgtgaagcggggaaaacgttcagcaacgccatt
gccgaagtgcgcgaagcggtagacttcctccattattatgccggtcaagtgcgtgacgat
ttcgataacgaaacgcatcgcccgttagggccggtagtctgcatcagtccgtggaacttc
ccgctggccattttcaccggccaaatcgccgccgcgctggcggcaggtaacagcgttctg
gcgaaaccggcagagcagacatcgctgattgccgcccagggcattgccattttgctggaa
gcgggcgtaccgccgggcgtcgtgcaactgttgccgggacggggagaaaccgtcggcgcc
cagcttaccgccgatacgcgtgtacgcggcgtgatgtttaccggctccacggaggtcgcg
acgttgttgcagcgcaacatcgccacgcgtcttgacgcccagggccgccctattccgttg
attgcggaaaccggcggtatgaacgctatgattgtcgactcttccgcgctcaccgagcag
gtggtcgtggatgtgctggcttccgctttcgacagcgccggacaacgctgttccgcgctc
cgcgtgctgtgtttgcaggacgatatcgccgaacatacgctgaaaatgttacgcggcgcg
atggcggagtgtcggatggggaatccaggccgtctgacgaccgatatcgggccggtgatc
gatagcgaggccaaagccaacattgaacgtcacatccagacgatgcgcgccaaaggccgc
ccggttttccaggccgcacgtgaaaacagcgatgatgcgcaggaatggcagaccggtacg
tttgttatgcccacgcttattgagctggaaaacttcgcagaactggaaaaagaggtcttc
gggcccgtgctgcacgtcgtgcgttataaccgtaaccaactggcggagcttatcgaacag
attaacgcttccggctacgggctaacgctgggcgtacatacccgtattgatgaaaccatt
gcgcaagtcaccggttccgcccatgtcggcaacctgtacgttaaccgtaatatggtgggc
gcggtcgtcggcgtccagccgtttggcggcgaaggcctgtccggcaccgggccaaaagcg
ggaggaccgctctatctctaccgcctgctggcacaccgcccgcccaatgcgctcaatacg
acgctgactcgtcaggatgcgcgttacccggtagatgcgcagcttaaaaccacgctactc
gcgccgttgaccgccctgacgcaatgggcggcggatcgcccggcgctacagacgctctgc
cgacaattcgccgatctggcgcaggccggcacgcagcgcctgctaccggggccgaccggc
gagcgcaatacctggacgctgttgccgcgtgaacgggtattatgcctggctgatgacgaa
caggacgcgttgacgcagcttgccgctgttctcgccgtcggcagtcaggcgctatggtca
gacgacgccttccaccgcgatctggcgaaacgtctccccgccgccgtcgcggcgcgtgtc
cagtttgcgaaagcggaaacgctgatggcgcagccgtttgacgcggtgattttccacggc
gactccgacaagctgcgaaccgtgtgcgaagccgtcgccgcccgcgaaggcgcgatagtg
tcggtacagggtttcgcccgcggcgaaagcaatatgctgctggaacggctctatattgaa
cgttcgctgagcgtaaacactgccgccgctggcggtaatgccagcctgatgacaattggc
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (15)   
   KEGG COMPOUND (15)   
Chemical reaction (10)   
   KEGG ENZYME (2)   
   KEGG REACTION (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

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