KEGG   Salmonella enterica subsp. enterica serovar Thompson: IA1_19835
Entry
IA1_19835         CDS       T02868                                 
Name
(GenBank) autoinducer
  KO
K10555  AI-2 transport system substrate-binding protein
Organism
sene  Salmonella enterica subsp. enterica serovar Thompson
Pathway
sene02010  ABC transporters
sene02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sene00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    IA1_19835
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IA1_19835
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sene02000]
    IA1_19835
Transporters [BR:sene02000]
 ABC transporters, prokaryotic type
  Saccharide, polyol, and lipid transporters
   AI-2 transporter
    IA1_19835
SSDB
Motif
Pfam: Peripla_BP_4 Glyco_tran_WecG Peripla_BP_6 DUF6848
Other DBs
NCBI-ProteinID: AGX12482
Position
4140631..4141653
AA seq 340 aa
MARHSIKMIALLTAFGLASAAMTVQAAERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDV
TYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSDTK
PECRSYYINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQ
EHPGWEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAIIAPDANALPAAAQAAENLKRNNL
AIVGFSTPNVMRPYVQRGTVKEFGLWDVVQQGKISVYVANALLKNMPMNVGDSLDIPGIG
KVTVSPNSEQGYHYEAKGNGIVLLPERVIFNKDNIDKYDF
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggcaagacacagcattaaaatgatcgccttactcactgcgtttggtctggcatctgcg
gcaatgaccgtgcaggcggcagagcggattgcttttattcccaaactggttggcgtgggc
ttttttaccagcggcggcaatggcgcgcaggaagcgggaaaagcgctgggcattgacgta
acttacgatggccctacagagcccagcgtctcaggccaggttcaactggtgaataacttt
gtcaatcaggggtatgacgccattatcgtttctgccgtttcgcctgatggcctgtgcccg
gcgttgaagcgggcaatgcaaagaggcgtgaaaatattaacctgggattccgataccaag
ccggagtgccgttcttactatatcaatcaagggacgccaaaacagctcggcagcatgctg
gtagagatggccgctcatcaggtggacaaagagaaagcgaaagtcgctttcttctattcc
agcccaacggtgaccgaccagaaccagtgggtgaaagaagctaaagccaaaattagtcag
gaacatccggggtgggagatagtcactacccagtttggctataacgatgccacgaaatcg
ctccagacggcggaaggtatcatcaaagcgtatcccgatctggatgccatcatcgcgcct
gacgctaacgctttacctgctgcggcacaggcggcggagaaccttaaacgcaataatctc
gcgattgttggttttagtacgccgaatgtaatgcgcccttatgttcagcgcggcactgtt
aaagagtttggcctgtgggatgtcgtccaacagggaaaaatttccgtatatgtcgccaac
gcgttgctgaaaaatatgccaatgaatgtcggtgattcactggatattcccggcatcggc
aaagtcaccgtttcacctaatagtgagcagggatatcactatgaggcaaaaggtaacggc
attgtgttattgccggagcgtgtcattttcaacaaagacaatatcgacaaatatgatttc
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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