KEGG   Salmonella enterica subsp. enterica serovar Typhimurium 138736: CY43_15260
Entry
CY43_15260        CDS       T03493                                 
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
seni  Salmonella enterica subsp. enterica serovar Typhimurium 138736
Brite
KEGG Orthology (KO) [BR:seni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:seni03021]
    CY43_15260
Transcription machinery [BR:seni03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CY43_15260
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AHX78643
UniProt: S5ZIY8
Structure
Position
complement(3100732..3101724)
AA seq 330 aa
MSQNTLKVHDLNEDAEFDENGVEAFDEKALSEEEPSDNDLAEEELLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQTQGLNIEALFRE
NT seq 993 nt   +upstreamnt  +downstreamnt
atgagtcagaatacgctgaaagttcatgatttaaatgaagacgcggaatttgatgagaac
ggagtagaggcttttgacgaaaaagccttgagtgaagaggaacccagtgataacgacctg
gctgaagaagagctgttatcgcaaggggccacacagcgtgtgttggacgcgactcagctt
taccttggtgagattgggtattcaccactgttaacagccgaagaagaagtctattttgcg
cgtcgcgcactgcgtggagatgtcgcttctcgccgtcgcatgattgagagtaacctgcgt
ctggtggtaaaaattgcccgccgttatggcaatcgtggactggcgttgctggacctgatt
gaagagggcaacctggggcttatccgtgcagtcgagaagtttgacccggaacgcgggttc
cgcttctcaacatacgcaacctggtggattcgccagacaatcgaacgggcgatcatgaac
caaacccgtacgattcgcttgccgattcacattgttaaagagctgaacgtatacctgcgc
accgcacgtgagttgtcgcataaactggaccacgaaccgagtgcggaagaaattgcagag
caactggataaaccggttgatgacgtcagccgtatgcttcgtctcaacgagcgcattacc
tcggtagacaccccgctgggcggtgattccgaaaaagcgttgctggacatcctggccgat
gaaaaagagaacggtccggaagacaccacgcaagatgacgatatgaaacagagcatcgtc
aaatggttgttcgaactgaacgccaaacagcgtgaagtgctggcgcgccgtttcggtctg
ctgggatatgaagctgcgacactggaagatgtaggccgtgaaatcggtcttacgcgtgaa
cgtgttcgtcagattcaggttgaaggcctgcgccgtctgcgcgaaattctgcagacgcag
gggctgaatatcgaagcgctgttccgcgagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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