KEGG   Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_16140
Entry
CFSAN001992_16140 CDS       T02479                                 
Symbol
hofQ
Name
(GenBank) outer membrane porin HofQ
  KO
K02507  protein transport protein HofQ
Organism
senj  Salmonella enterica subsp. enterica serovar Javiana
Brite
KEGG Orthology (KO) [BR:senj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:senj02044]
    CFSAN001992_16140 (hofQ)
Secretion system [BR:senj02044]
 Type II secretion system
  Type IVa pilus homolog protein
   CFSAN001992_16140 (hofQ)
SSDB
Motif
Pfam: Secretin Secretin_N STN FixH type_II_gspD_N0
Other DBs
NCBI-ProteinID: AGF83510
Position
3358088..3359326
AA seq 412 aa
MKRWIAIILIVLMPAAQAGKAAKVTLVVDDVPVVQVLQTLAEQDRQNLVVSPDVSGTLSL
HLTDVPWKQALQTVVNSAGLVLRQEGNILHVHSQAWQKEHSARQDAERLRLQANLPLENR
SISLQYADAAELAKAGEKLLSAKGTIMVDKRTNRLLLRDNRAALAELEKWVSQMDLPVAQ
VELAAHIVTINEKSLRELGVKWTLADATQAGSVGDVTTLSSDLSVAAATSRVGFNIGRIN
GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA
VLGMEVTPTVLQKGRIRLKLHISQNVPGQILQQADGEVLAIDKQEIETQVEVKSGETLAL
GGIFSRKNKSGSDSVPLLGDIPWLGQLFRHDGKEDERRELVVFITPRLVATE
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgaagcgatggatagccataatactgatagtcttgatgcccgccgcacaggcgggaaaa
gcggcgaaagtgacgctggtggttgacgacgtccctgtggtgcaggttttgcagacttta
gccgagcaggatcggcagaatctggtggtgtcgccggacgtcagcgggacattatcgcta
catctgacggatgtgccgtggaaacaggcgctacagacggtggtcaatagcgcggggttg
gtgctgcgtcaggaggggaatattcttcatgttcattcacaggcctggcagaaagaacac
agtgcgcggcaggatgccgagcggttaaggcttcaggctaatttaccgctggaaaaccgc
agcattagcctgcaatacgccgatgccgccgaactggcgaaagcgggcgagaaactcctg
agcgcgaagggaaccatcatggtagataagcgcaccaaccgcctgctgttgcgcgataac
cgcgcggccctggcggagctggaaaaatgggtatcgcaaatggatctgccggtggcgcag
gtggagctggcggcgcatatcgtcaccattaacgaaaagagtctacgggaactgggcgta
aagtggacgctggctgacgcgacgcaagcgggctcggtgggtgacgtgacgacgctttcc
agtgatttatccgtcgccgccgccacctcacgcgtcgggtttaacatcgggcgcattaac
ggacgcttgctggatctggagctgtcagcgctggagcaaaagcagcagttggatattatc
gccagcccccggctgctggcttcccatctgcagccagccagtatcaagcaaggcagcgaa
attccttatcaggtttccagcggcgaaagcggcgcgacctccgtggaatttaaagaagcg
gtgctgggaatggaggtgacgcccaccgttttgcaaaaagggcgcatccgcctgaagtta
catatcagccagaatgtccccggtcagatactacaacaggctgatggtgaagtgctggcg
atagataaacaggaaattgaaacgcaggtagaggtaaaaagcggcgagacgctggcgctg
ggcggtattttttcgcgaaaaaataaatcgggtagcgatagcgtgccgctgctgggggat
attccctggcttggtcagctcttccgccatgacggcaaagaggacgagcgacgcgaatta
gtggtgtttatcacccccagactggtggcgacagaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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