KEGG   Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_14170
Entry
SN31241_14170     CDS       T02779                                 
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
senn  Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Pathway
senn00740  Riboflavin metabolism
senn01100  Metabolic pathways
senn01110  Biosynthesis of secondary metabolites
senn01240  Biosynthesis of cofactors
senn02024  Quorum sensing
Module
senn_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:senn00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SN31241_14170
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SN31241_14170
Enzymes [BR:senn01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SN31241_14170
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SN31241_14170
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AGS28390
Position
1460837..1461940
AA seq 367 aa
MQDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGEPHAEVHALRMAG
AKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGI
AVSHGLMMSEAEALNKGFLKRMRTGFPYLQLKLGASVDGRTAMASGESQWITSPQARRDV
QRLRAQSHAILTSSATVLADDPALTVRWAELDASTQASYPQENLRQPVRIVIDSQNRVTP
AHRIVQQPGETWIARTQEDSRAWPDAVRTISVPAHNGHLDLVVLMMQLGRQQINSIWVEA
GPGLAGALLQAGLVDELIVYVAPKLLGTQARGLCELPGLEKLADAPQFTFSEIRHVGPDV
CLHMVSA
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcaggatgagttttacatggcgcgagcgctcaaactggcgcagcgtggacgtttcacc
actcacccgaaccctaatgtcggctgtgtcattgttaacaatggcgacatcgtcggcgaa
ggttatcaccatcgcgccggagagccgcacgccgaggtccatgcgctgcggatggcgggc
gcaaaagccaaaggcgcaaccgcctatgtcacgcttgaaccctgtagccatcatgggcga
acgccgccatgttgcgatgcgctgattgcggccggcgtcgcgcgcgtggtcgccgcgatg
caggacccgaacccacaggtcgccgggcgcgggctgtatcgcctgcaacaggcgggtatt
gcggtcagccacgggttaatgatgagtgaagcggaggcgctcaataaaggcttcctcaaa
cggatgcgtaccggattcccttatcttcagcttaaactgggcgcctccgtggatggacgg
acggcgatggccagcggcgaaagccagtggatcacctcgccgcaggcccggcgcgacgtt
cagcgcttgcgtgcgcaaagtcacgctatcttaaccagtagcgcgacggtattggctgac
gatccggccttgacggtgcgttgggcggagttagatgcctctacgcaggcgtcttacccg
caggaaaatctgcgccagccggtgcgaattgttatcgacagccaaaaccgggtaacgcct
gcgcatcgtattgtgcagcagcctggcgaaacgtggatcgcgcgtacccaggaagatagc
cgcgcgtggcccgatgcggttcgtactatcagcgtgccggcgcacaacggacatttggat
ctggttgtactgatgatgcagttaggcaggcagcagattaatagcatatgggttgaagcc
ggaccgggactggcaggcgcgttgttgcaagccgggctggtggatgaactgattgtctat
gtcgcgcctaaattgttgggaacccaggcgcggggattatgcgaattgccggggcttgag
aagctcgccgacgcgccgcaatttaccttcagcgaaatacgccatgtcggcccggatgtt
tgcctgcatatggtgagcgcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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