KEGG   Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_30480
Entry
SN31241_30480     CDS       T02779                                 
Name
(GenBank) Regulatory protein SdiA
  KO
K07782  LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
senn  Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Pathway
senn02020  Two-component system
senn02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:senn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SN31241_30480
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SN31241_30480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:senn03000]
    SN31241_30480
Transcription factors [BR:senn03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    SN31241_30480
SSDB
Motif
Pfam: Autoind_bind GerE Sigma70_r4_2 HTH_23 HTH_20 Sigma70_r4 CD4-extracel
Other DBs
NCBI-ProteinID: AGS30020
Position
complement(3069440..3070162)
AA seq 240 aa
MQENDFFTWRRAMLLRFQEMAAAEDVYTELQYQTQRLEFDYYALCVRHPVPFTRPKISLR
TTYPPAWVTHYQSENYFAIDPVLKPENFRQGHLHWDDVLFHEAQAMWDAAQRFGLRRGVT
QCVMLPNRALGFLSFSRSSLRCSSFTYDEVELRLQLLARESLSALTRFEDDMVMAPEMRF
SKREKEILKWTAEGKTSSEIAIILSISENTVNFHQKNMQKKFNAPNKTQIACYAAATGLI
NT seq 723 nt   +upstreamnt  +downstreamnt
atgcaggaaaatgatttcttcacctggcgacgcgcaatgttgttacgctttcaggagatg
gcggcagcagaggatgtttacactgaattgcaatatcagacacagcggctggaatttgat
tattatgccctgtgtgttcgtcatcccgtcccctttacccggcctaaaatatcgcttcgt
accacttatcctccggcgtgggtaacgcattatcagtccgaaaactattttgcgatcgat
ccggtattaaagccggaaaatttcaggcaaggtcatttacattgggatgacgtgctattt
catgaagcgcaggcgatgtgggatgccgcccagcgtttcggattacgcagaggcgtaacc
cagtgtgtgatgttgccgaaccgggcgctgggctttttatctttctcccgtagcagttta
cgctgctcctcgtttacctacgatgaagtggaactgaggttgcaactgctggcgcgggag
agtctttcggcgctgacaagatttgaagacgacatggtgatggcgcctgagatgcgtttc
agtaaacgtgagaaagagattctgaagtggacggcggaagggaagacctcatcagagatc
gccattattctgtcgatttctgaaaataccgttaacttccatcagaaaaatatgcagaag
aaattcaatgcgccaaataaaacacagattgcctgctacgctgcggcgacaggtctgata
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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