KEGG   Salmonella enterica subsp. enterica serovar Enteritidis EC20090531: AU40_21605
Entry
AU40_21605        CDS       T03761                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
senq  Salmonella enterica subsp. enterica serovar Enteritidis EC20090531
Pathway
senq03420  Nucleotide excision repair
senq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:senq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AU40_21605 (uvrD)
   03430 Mismatch repair
    AU40_21605 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:senq03400]
    AU40_21605 (uvrD)
Enzymes [BR:senq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AU40_21605 (uvrD)
DNA repair and recombination proteins [BR:senq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AU40_21605 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     AU40_21605 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_11 AAA_22
Other DBs
NCBI-ProteinID: AHR21315
Position
4024366..4026528
AA seq 720 aa
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLSVENNSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQM
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWVRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNDEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG
TPLAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtttcttacctgctcgacagccttaatgataaacagcgcgaagcggtggccgcg
ccacgtagcaacatgctggtgctggcgggcgcgggaagcgggaaaacccgcgtgctggtg
caccgtatcgcctggttactgagcgtagaaaacaattcgccatactccatcatggcggtg
acctttaccaataaagcggcggcggaaatgcgccatcgtattggccagttgatggggacc
agccagggcggaatgtgggtagggacgttccacggtctggcgcaccgcctgctgcgcgcg
catcatatggacgctaatttgccgcaggatttccagattctcgacagcgaagatcagatg
cgtttgcttaaacgcctgattaaggcgatgaatcttgatgagaagcagtggccgccgcgt
caggcgatgtggtacatcaatagccagaaagacgaagggctacgcccgcaccatatccaa
agctatggcaatccggtggaacagacctggcagaaggtgtatcaggcctatcaggaagcg
tgcgatcgcgctggtctggtggatttcgccgagctactgctgcgcgctcatgaactatgg
ctgaacaagccgcacatcctgcaacactatcgcgagcggtttactaacatcctggtggac
gaattccaggataccaacaacattcagtacgcctgggttcgtctgctggcgggcgatacc
ggtaaggtgatgattgtcggcgacgatgaccagtcgatttacggctggcgcggggcccag
gtagagaacatccagcgcttcctcaatgatttccccggcgcgcagaccattcgtctggag
cagaattaccgctcgaccagcaacatccttagcgcggcgaacgctctgattgagaataac
aatgggcgtttgggtaaaaagctgtggactgacggcgttgatggcgaaccgatatcgctg
tactgcgctttcaacgaactggatgaagcgcgctttgtggttaaccgtatcaaaacctgg
caggacaacggcggcgcgcttgcgcaatgcgccatcctttatcgcagcaacgcccagtcg
cgcgtgctggaagaagcgttattacaggccagtatgccgtaccggatttacggcggtatg
cgcttcttcgaacgccaggagatcaaagatgcgctctcttatctgcgtttgattgccaat
cgcaacgatgatgccgcctttgaacgcgtggtgaataccccaacgcgcggtatcggcgac
cgcacgctggacgtggtgcgccagacctcgcgcgatcgccagctaacattgtggcaggcg
tgccgtgaattgttacaggaaaaagccctggccgggcgtgcggccagcgcgctgcaacgc
tttatggaactgatcgacgctctggcgcaggaaactgccgacatgccgctgcatgtgcag
actgaccgggtgatcaaagattccggcctgcgcaccatgtatgagcaagaaaaaggcgag
aaaggccagacgcgcatcgaaaacttagaggaactggtgacggcgacgcggcagttcagc
tacaacgacgaagatgaagatttaatgccattgcaggccttcctctctcacgcggcgctg
gaagcgggcgaggggcaggcggatacctggcaggatgcggtacagctgatgacgctgcac
tcggccaaagggctggagttcccgcaggtgtttatcgtcgggatggaagaggggatgttc
cccagccagatgtcgctggatgagggcgggcgtttggaagaggagcgtcgtctggcctac
gtcggcgttacccgtgccatgcagaaactgacgctaacctatgccgaaactcgccgtctg
tatggtaaagaggtctaccatcgcccgtcgcgttttatcggcgagttgccggaggagtgc
gtggaagaggtccgtctgcgcgccaccgtcagtcgtccggtgagccatcaacgaatggga
acgccgctggcggaaaacgacacaggctacaaactcggccaacgcgtgcgccatgcgaag
ttcggcgagggaactattgtcaacctggagggcagcggcgagcatagccggttgcaggtg
gcttttcaggggcaagggatcaaatggctggttgccgcgtatgcgaagctggaaacggtt
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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