KEGG   Salmonella enterica subsp. enterica serovar Agona 24249: Q786_19365
Entry
Q786_19365        CDS       T02944                                 
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
sens  Salmonella enterica subsp. enterica serovar Agona 24249
Pathway
sens03420  Nucleotide excision repair
sens03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sens00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Q786_19365 (uvrD)
   03430 Mismatch repair
    Q786_19365 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sens03400]
    Q786_19365 (uvrD)
Enzymes [BR:sens01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Q786_19365 (uvrD)
DNA repair and recombination proteins [BR:sens03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Q786_19365 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     Q786_19365 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_11 AAA_22
Other DBs
NCBI-ProteinID: AHB46459
Position
4040780..4042942
AA seq 720 aa
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLSVENNSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQM
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWVRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNDEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG
TPLTENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtttcttacctgctcgacagccttaatgataaacagcgtgaagcggtggccgcg
ccacgcagcaacatgctggttctggcaggcgcggggagtggtaaaacccgcgtgctggtg
caccgtatcgcctggttactgagcgtagaaaacaactcaccatattccatcatggcggtg
acctttaccaataaagcggcggcggaaatgcgccatcgtattggccagttgatggggacc
agccagggcggaatgtgggtagggacgttccacggtctggcgcaccgcctgctgcgcgcg
catcatatggacgctaatttgccccaggatttccagattctcgacagcgaagatcagatg
cgtttgcttaaacgcctgattaaggcgatgaatcttgatgagaagcagtggccgccgcgt
caggcgatgtggtacatcaatagccagaaagacgaagggctacgcccgcaccatatccaa
agctatggcaacccggtggagcagacctggcagaaggtgtatcaggcctatcaggaagcg
tgcgatcgcgctggtctggtggattttgccgagctactgctgcgcgctcatgaactatgg
ctgaacaagccgcacatcctgcaacactatcgcgagcggtttactaacattctggtggac
gaattccaggataccaacaatattcagtacgcctgggttcgtctgctggcgggcgacacc
ggcaaggtaatgatcgttggcgacgatgaccagtcgatctacggctggcgcggggcccag
gtagagaacatccagcgcttcctcaatgatttccccggcgcgcagaccattcgtctggag
cagaattaccgctcgaccagcaacatccttagcgcggcgaacgctctgattgaaaacaac
aatgggcgtttgggtaaaaaactgtggactgacggcgttgacggcgaaccgatatcgctg
tactgcgctttcaacgagctggatgaagcgcgctttgtggttaaccgtataaaaacctgg
caggacaacggcggcgcgcttgcgcaatgcgccatcctttatcgcagcaacgcccagtcg
cgcgtgctggaagaagcgttattacaggccagtatgccgtaccggatttacggcggtatg
cgcttcttcgaacgccaggagatcaaagatgcgctctcttatctgcgtttgattgccaat
cgcaacgatgatgccgcctttgaacgcgtggtgaataccccaacgcgcggcatcggcgac
cgcacgctggacgtggtgcgccagacctcgcgcgatcgccagctaacattgtggcaggcg
tgccgtgaattgttacaggaaaaagccctggccgggcgtgcggccagcgcgctacaacgc
tttatggaattgattgacgctctggcgcaggaaaccgccgacatgccgctgcatgtgcag
actgatcgggtgatcaaagattccggcctgcgcaccatgtatgagcaagaaaaaggcgag
aaaggccagacgcgcatcgaaaacttagaggaactggtgacggcgacgcggcagttcagc
tacaacgacgaagatgaagatttgatgccgttgcaggccttcctctctcacgcggcgctg
gaagcgggcgaggggcaggcggatacctggcaggatgcggtacagctgatgacgctgcac
tcggccaaagggctggagtttccgcaggtgtttatcgtcggcatggaagagggcatgttc
cccagccagatgtcgctggatgagggcgggcgtttggaagaggagcgtcgtctggcctac
gtcggcgttacccgtgccatgcagaaactgacgctaacctatgccgaaactcgccgtctg
tatggtaaagaggtctaccatcgcccgtcgcgtttcatcggcgagttgccggaggagtgc
gtggaagaggtccgtctgcgcgccaccgtcagtcgtccggtgagccatcaacgaatggga
acgccgctgacggaaaacgatacaggctacaaactcggccaacgtgtgcgccatgcgaag
ttcggcgagggaactattgtcaacctggagggcagcggcgagcatagccggttgcaggtg
gcttttcaggggcaagggatcaaatggctggttgccgcgtatgcgaagctggaaacggtt
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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