KEGG   Staphylococcus epidermidis PM221: SEB_01053
Entry
SEB_01053         CDS       T03289                                 
Name
(GenBank) Exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
sepp  Staphylococcus epidermidis PM221
Brite
KEGG Orthology (KO) [BR:sepp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sepp03400]
    SEB_01053
DNA repair and recombination proteins [BR:sepp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SEB_01053
    Archaeal homologous recombinant proteins
     SEB_01053
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 SMC_N ABC_tran YjcZ PriA_3primeBD
Other DBs
NCBI-ProteinID: CDM13610
Position
1050510..1053539
AA seq 1009 aa
MKPLHIVMENFGPFIKETIDFEQVETDQLFLISGKTGSGKTMIFDAIVYALYGMASTKTR
KEGDLRSHFADGKSPMSVIYQFKVNNQTFKIHREAPFIKEGNITKTQAKLNIYELVDNQF
ELRESKVNQGNQFIVQLLGVNAEQFRQLFILPQGEFKKFLQSNSKDKQSILRTLFNSERF
DEIRHLLVENVKQEKVQIENRYTQIENLWNDIDTFNNDELALYKELESSQTDKMIEKFPQ
FNDYGCKILKSFEEAKNKITKELDDLNHKYKVNVELSENTKKLKAEKIKFDDLKKEQNYI
DKLKQELKMIQESKVLITYFTRLQSLKKDKDELVSLHEQSKLNETNYHNEIKGFQKQLEH
LSTRENEITQFNQYLEKNQVFFNQLDKIISSYQQKPVIEEEIKRLYSEYNDLITKKEELT
KEMNNKNKDFAIIEHYTEEIYKLKKIIDESERQKKDEKLFDKLQLDKSSYLSKLKEKKEQ
LNEIESSITNIDATLIDLNDKKDFVNEIKSAMSIGDTCPICGNEIHSLGEHIDFESIAQK
NNKIKRLESKKVKIRDEIIKIETRIEELNHRENELNFEKQEKKDISELQKQLNHLNQLKD
EQQSINKLVENFEKQEKEIVNKIHQFDLDLSRKNTQKEKLEIQINDFERHSQFSSVNDFE
TYYSHAKKQVETYEYENEKTKDKLNELNNKLKIEMNDQKHLTENLTQTSKEINNLELKME
KEMQQLGFESYDQVKSAADLSAQKDEIEREINIYNKNYQSYEIEINRLKELVKGKKLLNL
EELRQSIEKTNLKLDETNSQIATISYKIDNNSNKFNKIKNIIQILDDELKVQKEIFLLSE
ILAGKNDYKLTLENYVLIYYLEKIIFQANQRLSFMSGNRYQLIRREAISLGLSGLEIDVF
DFHSNKSRHISSLSGGETFQASLALALGLSEVVQQESGGITLDSMFIDEGFGTLDQETLE
TAIDTLINLKSSGRMVGIISHVSELKQRIPLILEVTSNQYESHTQFRKN
NT seq 3030 nt   +upstreamnt  +downstreamnt
ttgaagcctttacatatagttatggagaactttggcccttttattaaagaaactattgat
tttgagcaagttgaaactgatcaactctttttaattagtggtaaaactggatctggtaaa
acaatgatttttgatgctatagtatacgcattatacggtatggcttcgaccaaaactaga
aaagaaggagatttaagaagtcattttgcagacggtaaatcgccaatgtctgtaatttat
caatttaaagttaataatcaaacttttaaaattcatagagaagcgccatttattaaagag
gggaatataactaaaacacaagccaagttaaatatatatgaattagttgataatcaattt
gaattaagagaaagtaaagtgaatcaaggtaatcaatttatcgtacaattattaggcgtt
aatgctgaacaatttcgtcaattatttattttgcctcaaggagaatttaaaaagtttctt
cagtcaaatagtaaagacaaacaatcgattcttagaacactttttaatagtgagcgattt
gatgagattagacatctacttgtagaaaatgtaaagcaagaaaaagtacaaattgaaaat
agatacactcaaattgaaaatttatggaatgatatagatacatttaataatgatgaattg
gccttatataaagaattagagagttctcagacagataaaatgattgaaaaattcccacaa
tttaatgattatggatgcaaaattctcaagtcatttgaagaagctaagaataaaataact
aaggaattagatgatttaaatcataaatataaagtgaatgttgaattaagtgagaatact
aaaaaattaaaagcggaaaaaatcaaatttgacgatttgaaaaaagaacaaaattatatt
gataaattaaagcaagaattaaaaatgattcaggaatctaaagtattaatcacttatttt
actaggttacaaagtttaaaaaaagataaagatgaattagtgtcacttcatgagcaatca
aaattaaacgaaacaaactatcacaatgaaattaaaggttttcaaaaacaactcgaacat
ttatcaacacgagaaaatgaaataactcaatttaatcagtatctagaaaaaaaccaagtt
ttcttcaatcaattagataagattattagtagttatcaacaaaaaccggtaattgaagaa
gaaataaaaagattatacagtgaatataatgatttaataaccaaaaaagaagaattgacg
aaagaaatgaacaacaagaacaaagattttgcaattattgaacattacactgaagagatt
tataagctgaaaaagattatagatgaatctgaaagacaaaaaaaggatgagaaattattt
gataaattacaactagataaatcatcttatcttagcaaattaaaagagaagaaagaacag
ttaaatgaaattgaatcatcaatcaccaatatagatgcgactttaattgatttgaatgac
aaaaaggattttgtaaatgaaataaagtccgctatgtcaattggagatacctgtccaatt
tgtggtaatgaaatacattcattgggagaacatattgattttgaatcaattgctcaaaaa
aataataaaataaaacggttagaaagtaagaaggtaaaaattcgtgatgaaataatcaaa
atagaaactcgaattgaagaattaaatcatagagaaaatgaattaaattttgagaaacaa
gaaaagaaggatattagtgagcttcaaaaacagcttaatcatttgaatcaactaaaagac
gagcaacaaagcataaataagttagtagaaaattttgagaaacaagaaaaagaaatagtt
aataaaatacatcagtttgatttagatttgagtcgaaagaacacgcaaaaagaaaaactg
gaaattcaaattaatgattttgaacgacattcacaattttcatcagtaaatgattttgaa
acttattattctcatgctaaaaaacaagttgagacgtatgagtatgagaatgagaaaact
aaagataaattgaacgagttgaataataagttaaagatagaaatgaatgatcaaaaacat
ttaactgagaatttaactcaaacaagtaaggaaataaataatttagaattaaaaatggaa
aaagaaatgcaacaacttggttttgagtcttatgatcaagtcaaaagcgctgcagattta
agtgctcaaaaagatgaaatagaaagagaaattaatatttataataagaactatcaaagt
tatgaaatagagattaacagactcaaagaattggttaagggcaaaaaattattaaattta
gaagaattacgacaatctatagaaaaaacaaacttgaaactagatgaaacgaattcacaa
atagctacgattagctataaaatagataataactctaacaaatttaataaaataaaaaat
ataattcagattctcgatgatgaattaaaagtgcaaaaagaaattttcttgctatcagaa
atattagctggtaaaaatgattataaattaacactagaaaattatgttttaatttattac
ttggaaaaaataatttttcaagcgaatcaacgactttcatttatgagtggaaatagatat
caactgattagaagagaggccatttccttagggttaagtggattggaaattgacgtgttt
gattttcattcaaataaatcgagacacataagttcactttcaggaggagaaacatttcaa
gcatcactagctttagctttaggattaagtgaagttgtacaacaagaatcaggtggaatc
actttagattctatgtttatagatgaaggatttggcactttagatcaagaaacactcgaa
actgcgatagatacattaattaatttaaaatcatctgggcgcatggttggtataatctca
catgtaagcgaacttaagcaacgcatacctttgattttagaagtgacaagtaaccaatac
gaaagtcatacacaatttagaaaaaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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