KEGG   Staphylococcus epidermidis PM221: SEB_01347
Entry
SEB_01347         CDS       T03289                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
sepp  Staphylococcus epidermidis PM221
Pathway
sepp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sepp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SEB_01347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sepp03400]
    SEB_01347
Enzymes [BR:sepp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SEB_01347
DNA repair and recombination proteins [BR:sepp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SEB_01347
    RecFOR pathway proteins
     SEB_01347
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 DUF815 Mg_chelatase AAA_22 bpMoxR RNA_helicase AAA_14 AAA_16 AAA_3 nSTAND3 Sigma54_activ_2 AAA_18 TIP49 RsgA_GTPase Bac_DnaA Rad17 TsaE NB-ARC NTPase_1 AAA_28 ABC_tran AAA_17 AAA_19
Other DBs
NCBI-ProteinID: CDM13898
Position
complement(1374186..1375190)
AA seq 334 aa
MDKRMVDQEFHNEDTDLELSLRPTQLKQYIGQSSIKSNLEVFIKAAKLRQEPLDHVLLFG
PPGLGKTTLSNIIANEMEVNIRTISGPSLERPGDLAAILSGLQPGDVLFIDEIHRLSSVV
EEVLYPAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATTRAGSLTGPLRDRFGVHLRLE
YYNENDLKEIITRTAEVLGTDIDKESALELARRSRGTPRIANRLLKRVRDFQQVNEDDQI
YIETTKRALQLLQVDQHGLDYIDHKMMNCIINQYNGGPVGLDTIAVSIGEERVTIEDVYE
PFLIQRGFLERTPRGRKATALAYEHFNTTNEKRE
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggataaaagaatggtcgatcaagaatttcataatgaagatactgacttggaattatca
ctaagaccaacacaattaaagcagtatataggtcaatcctctataaaaagtaatttagaa
gtctttatcaaggctgccaaacttagacaagagccactcgatcatgtcttgttatttggt
cctccaggactaggtaaaacgacgctatcaaatatcattgctaatgagatggaggtaaat
attcgtaccatctcaggaccatctttagaaagaccaggtgacttagcagcgatattatct
gggttacagccaggtgatgtgttatttatcgatgaaattcatagattaagtagtgttgtt
gaagaagttctgtatcctgctatggaagattttttcttagacatcatcatcggtaaaggc
gatgaagcaagaagtattcgaatagatttgccgccatttacattagttggagcaacgaca
agagccggtagtttaacggggccattaagagatcgttttggtgtgcatcttagattagag
tattataatgaaaatgatttaaaggaaataatcacgcgaactgcagaggtcttaggaacg
gacatcgataaggaaagcgccttagaattagctcgtcgttctagaggtacacctaggata
gcgaataggttactaaaacgtgtaagagacttccaacaagtaaatgaagacgatcagata
tatattgaaacgactaaacgagcattacaattactgcaggtcgaccaacacggtttagat
tacattgaccataaaatgatgaattgtattattaatcagtacaatggtggtcctgttgga
ttagatacaattgcagtttcaataggtgaagaacgagtgactatagaagatgtatatgaa
cctttcttaatccaaagaggtttcttggaaaggactccacgtgggagaaaagcaactgct
ttagcctatgaacactttaatactactaacgaaaagagggaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (27)   
   Pfam (27)   
All databases (36)   

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