KEGG   Staphylococcus epidermidis PM221: SEB_01518
Entry
SEB_01518         CDS       T03289                                 
Name
(GenBank) Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
sepp  Staphylococcus epidermidis PM221
Brite
KEGG Orthology (KO) [BR:sepp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sepp03009]
    SEB_01518
Enzymes [BR:sepp01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     SEB_01518
Ribosome biogenesis [BR:sepp03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SEB_01518
SSDB
Motif
Pfam: PseudoU_synth_2 DUF5623
Other DBs
NCBI-ProteinID: CDM14062
Position
1559931..1560755
AA seq 274 aa
MKFTIPKQFNDYTLREIFQYLKLPKKDLHQLNMSKEILINKEYGTLLNNVKTGDHVEIPT
PNEVSNYLPSYRYAQIYYEDDDLAIVMKPKGVKTHPNDLKESNTLMNHVIYTVDSEYVEP
IHRLDQETVGLLIVAKNPLMKKILDRMLEYNEITRIYKANVKALLPIKPQTIDMPIGKDK
FHSNKRRISNTGQRAITHIINSKMIKEGVCQLDIKLDTGRTHQIRVHLAEIGHPVIGDPL
YGTSTLRQLELNSHQIEFTHPLTQEIISVSLDDK
NT seq 825 nt   +upstreamnt  +downstreamnt
atgaaatttacaatacctaaacaatttaacgattatacattgagagagattttccaatat
ttaaaattacctaaaaaagacttacatcaactgaatatgtctaaagaaattttaattaat
aaagagtacggtacattattaaataatgttaaaactggtgatcatgttgagataccaacc
cctaatgaagtaagtaattatttaccaagttatcgatatgctcaaatttattacgaggat
gatgacttggccattgtcatgaaaccaaaaggtgttaaaacgcatcccaatgatttaaaa
gagagcaacacacttatgaaccatgtgatttacactgttgatagtgaatatgttgagccc
atacatcgactagatcaagaaacagtaggtttattgatagttgctaaaaatccgcttatg
aaaaaaatcttagaccgaatgttagaatataatgaaattacgcgtatatataaagcaaat
gtcaaagcgttgttacctattaagccacaaacgatagatatgcctattggtaaagataaa
tttcattcaaacaaacgaagaatttccaacacaggtcaacgtgcaatcactcacattatt
aactctaaaatgattaaagaaggtgtatgtcaactcgacattaaactagatacaggtcga
acacaccaaattcgtgtgcaccttgctgagattggccatccagttattggggatccactt
tatggaacttcaacattacgacaattagagctaaatagtcatcaaattgaatttactcat
ccactgactcaagaaattatttctgtaagtctagatgataaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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