KEGG   Staphylococcus epidermidis SEI: DP17_332
Entry
DP17_332          CDS       T03343                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
seps  Staphylococcus epidermidis SEI
Pathway
seps03030  DNA replication
seps03430  Mismatch repair
seps03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:seps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DP17_332 (dnaE)
   03430 Mismatch repair
    DP17_332 (dnaE)
   03440 Homologous recombination
    DP17_332 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seps03032]
    DP17_332 (dnaE)
   03400 DNA repair and recombination proteins [BR:seps03400]
    DP17_332 (dnaE)
Enzymes [BR:seps01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DP17_332 (dnaE)
DNA replication proteins [BR:seps03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DP17_332 (dnaE)
DNA repair and recombination proteins [BR:seps03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DP17_332 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP tRNA_anti-codon HROB
Other DBs
NCBI-ProteinID: AIR81954
Position
complement(367361..370558)
AA seq 1065 aa
MVAHLNIHTSFDLLDSSLRIDALIDKAKKEGYRALAITDTNVLYGYPKFYDACIAAHIHP
IFGMTIYLTDGLYTIETVVLAKNNQGLKSLYQISSAIMMRNKEEVPIEWLKRYDEHLIII
FKEAELSHKQIIDAFEGKKELYLNHNSNNTLTGKRVWMQSARYLNEDDAETIPALHAIRD
NTKLDLIHEKETLDEHFPSIEELQTLNLSEDMITNANEIEELCQAEIAYHQSLLPQFVTP
NGETSKDYLWTILIHRLREWELNDKTYFNRLKHEYKIITDMGFEDYFLIVSDLIHFAKTH
EVMVGPGRGSSAGSLVSYLLGITTIDPLKYNLLFERFLNPERVTMPDIDIDFEDTRREKV
IKYVQDKYGEHHVSGIVTFGHLLARAVARDVGRIMGFDETSLNEISKLIPHKLGITLEEA
YQKSEFKAFVHRNHRNERWFEVSKKLEGLPRHTSTHAAGIIINDQPLFKFAPLTTGDTGL
LTQWTMTEAERIGLLKIDFLGLRNLSIIHQIILQVKKDLNINIDIEAIPYDDKKVFDLLS
NGDTTGIFQLESDGVRSVLKRLQPEHFEDIVAVTSLYRPGPMEEIPTYITRRHNPNQVAY
LHPDLEPILKNTYGVIIYQEQIMQIASQVAGFSYGEADILRRAMSKKNRAILESERQHFI
DGAKNNGYGEQISKQIFDLILKFADYGFPRAHAVSYSKIAYIMSYLKVHYPHYFYANILS
NVIGSEKKTAAMIDEAKHQRISILPPNINQSHWYYKASNKGIYLSLGTIKGIGYQSVKLI
IDERQQNGPYRDFFDFSRRIPKRVKNRKLLESLILVGAFDTFGKTRATLLQAIDQVLDLN
SDVEQDEMLFDLLTPKQSYEEKEELPDQLLSDYEKEYLGFYISKHPVEKKFEKKQYLGIF
QLSNGSHYQPILVQFDHIKQIRTKNGQNMAFVTMNDGRTMMDGVIFPDKFKKYETSISKE
QMYIVLGKFEKRNQQMQLIINQLFEVEAYEQTKLSNSKKVILRNVTHLEPQFEHSKVESN
EQHALNIYGFDESANKMTMLGQIERQRQNFDLLIQTYSPADIRFI
NT seq 3198 nt   +upstreamnt  +downstreamnt
atggtagcacatttaaatattcatacttcttttgacctgttagattctagtttaagaatt
gatgcattaatagataaagctaaaaaagaaggatatcgtgcgcttgcaataaccgataca
aatgtattgtacggttatccaaagttttatgatgcttgtattgcagctcacatacatcca
atctttggtatgactatatatttaacggatggtctctatactattgaaacggttgtttta
gcaaaaaataatcaaggactcaagtcattatatcaaatttcttctgctataatgatgaga
aataaagaagaagtgccaattgaatggctaaaaagatacgacgaacatttaattatcata
tttaaagaggctgagttgtctcataagcaaattattgatgcttttgaaggtaagaaagaa
ttatatttaaatcacaatagtaataatacattgactggcaaacgtgtatggatgcaatct
gcaagatacttaaatgaagatgatgctgaaaccattccagcgttacatgccataagagat
aatactaagttagatttaatacatgagaaagaaacacttgatgaacattttcctagtata
gaagaacttcaaacactaaatcttagtgaagatatgattactaacgcgaatgaaattgaa
gaattatgccaagcagaaattgcataccatcaatccctgttgccacaatttgtgacacct
aatggtgaaacttcgaaagattatctttggacgatacttatacataggttacgagaatgg
gaacttaatgataaaacttatttcaatcggttgaaacatgaatataaaattattactgat
atgggtttcgaggattattttcttattgtaagtgatttgattcattttgctaaaacacat
gaagtgatggttgggccaggtcgtggttcatcagcagggtcattagtaagttatttatta
ggtattactactatagacccgttaaaatataatcttttatttgaaagatttcttaatcct
gaacgcgtaactatgccagatattgatattgattttgaagacacgagacgtgaaaaagta
attaagtatgtacaagataaatatggtgaacatcatgtatcaggtattgtgacatttggg
catctgttagctcgtgctgttgctagagatgtaggaagaataatgggatttgatgaaacg
agtttaaatgagatttcaaaacttattccacataaattaggtataactcttgaagaagca
taccaaaagtcagagtttaaagcatttgttcatcgtaatcatagaaatgaacgttggttt
gaagtgagtaaaaagttagaaggattaccaagacatacgtctacgcatgctgcaggtatc
attatcaatgatcaaccattattcaaatttgccccattaacaactggtgatacaggatta
ttaacgcagtggactatgacagaagcggaacgtataggattattaaaaattgatttcttg
ggattacgcaatctatcaattattcatcaaattattttacaagttaaaaaggatttaaat
ataaatattgatatagaagctataccttatgatgataaaaaagtttttgatttattatca
aacggggacactacaggtatatttcaattggaatcagacggtgttagaagcgtattaaaa
agactgcaacctgaacattttgaagatatcgtagctgtcacatcattatatagaccagga
ccaatggaagaaataccaacatatataacccgtagacataatcctaaccaagttgcttat
ttacatccagatttagaaccaatcttaaaaaacacatatggtgttatcatttatcaagaa
caaataatgcaaatagcaagtcaagttgctggttttagttatggtgaagcagatatttta
agaagggcaatgagtaaaaagaatcgtgcaatcttagaaagtgagcgtcaacatttcatt
gatggtgcaaaaaataacggttacggtgaacagataagtaagcaaatttttgatttaata
cttaagtttgcagattatgggttcccacgtgcccatgctgttagttactcaaaaattgca
tacattatgagctatttaaaagtgcactatcctcattatttttatgcaaatatcttgagt
aatgtaataggaagtgaaaaaaagactgcagctatgattgacgaagctaagcatcaaaga
attagcatcttgcctcccaatattaatcaaagtcattggtattataaggcaagtaataaa
ggaatatatctgtctttaggtacaattaaaggaattggatatcaaagcgttaaattaatt
attgatgaacgtcagcagaatggaccttatagagatttctttgatttttcaagacgtata
ccaaaaagggtgaaaaatagaaaattacttgagtctcttatcttagtaggcgcattcgac
acttttggcaaaactagagcgacattattacaagcaattgatcaagtattagatttgaat
tctgatgttgagcaagatgaaatgcttttcgatcttttaactcctaaacaatcgtatgaa
gaaaaagaggaactacctgatcaattattaagtgattatgaaaaagaatacctaggattc
tatattagtaaacatccagttgaaaagaaatttgaaaagaaacaatatttaggcatattt
caattgtctaatggaagtcactaccaacctatacttgttcaatttgaccatatcaaacaa
ataagaacgaagaatggtcaaaatatggcatttgtaacgatgaatgatggaagaacgatg
atggatggagtgattttcccagataagtttaaaaaatacgaaacttctatttcaaaggaa
cagatgtatatcgtattaggtaaatttgaaaagcgtaaccaacaaatgcaacttatcatc
aatcaactttttgaagttgaagcgtatgagcaaacaaaattgtctaattcgaaaaaagtt
attttacgtaatgtaacacatctagaaccacaatttgaacattcaaaagtagaatctaat
gaacaacatgcattaaatatttatggttttgacgaaagtgcaaataagatgacaatgttg
ggacaaattgaacgtcaacgtcaaaattttgatctattaatacaaacttattcgccagct
gatattagatttatttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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