KEGG   Staphylococcus equorum: SE1039_09600
Entry
SE1039_09600      CDS       T04160                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
seqo  Staphylococcus equorum
Pathway
seqo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:seqo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SE1039_09600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:seqo03400]
    SE1039_09600
Enzymes [BR:seqo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SE1039_09600
DNA repair and recombination proteins [BR:seqo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SE1039_09600
SSDB
Motif
Pfam: PriA_3primeBD ResIII PriA_C DEAD PriA_CRR Helicase_C PIF1 Helicase_C_2 AAA_16 AAA_19 DUF4300 AAA_30 T2SSE Pilus_CpaD YjdM_Zn_Ribbon Zn_Tnp_IS1595
Other DBs
NCBI-ProteinID: ALM56743
UniProt: A0A1E5TL73
Position
1004347..1006755
AA seq 802 aa
MIAKVIVDIPSKSVDFTFDYIIPTRLQSMIQVGMRVIVPFGPRTIQGYIMEITEQPDANI
DIAKLKEIKEIQDIKPELTEELIKLTDWYNNYFVTKRISMLEVMLPSAIKAKYTKVFSIE
NDEAIPEQLRLRFDSEGHYAYKEAQYNDDLSAISPLLKQGDISEVTLLSQSLSKKKQRAV
RVVEGFEYDAVLGSLEKSQKQYDLYAYLIDERHHTVLLKQLEAMNFSKSSIDTLMRKGFV
EKYDAIVERDPFETRVFEQDEKQQLTADQQQAFEAILKNIKAHEQRTFLLHGVTGSGKTE
VYLQTIEEVLHLDRQAMMLVPEIALTPQMVLRFKQRFGDEVAVLHSGLSKGERYDEWQKI
RDGKARVSVGARSSVFAPFKNLGMIIIDEEHESSYKQEDYPRYHARDIAEWRSQYHQCPL
ILGSATPSLETYARADKGVYELLSLPNRVNQQALPEIEIVDMRAELSSGNRSMFSEQLRE
AIQTRLDKQEQIVLFLNRRGYASFMLCRDCGHVPQCPNCDISLTYHKSSDQLKCHYCGHQ
ETPPSKCPNCESEHIRQVGTGTQRVEELLQEVFQEARIIRMDVDTTSRKGAHEKLLNDFG
SGKGDILLGTQMIAKGLDFPNITLVGVLNADTMLNLPDFRASERTYQLLTQVSGRAGRHE
KEGQVIIQTYNPEHYAIKDVQENDYPAFFNKEMNYRKIGKYPPYFFLINFTISHKDMKKV
MEASKHIHKILLQHLSDKALVLGPSPAALSRINNEYRFQILIKYKSEPALHEALKYLDDY
YHDQYLKDKLSLKIDINPQMMM
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgatagcaaaagtaattgttgatataccttctaaaagtgtggactttacgttcgattat
ataattcctacaagactacaatctatgatacaagttggtatgcgtgtcattgtgcctttt
ggaccaaggacaattcaaggctatattatggaaataacagaacaacccgatgcaaatata
gatatagctaagcttaaagagataaaagaaattcaagatattaaaccagaattaactgaa
gaacttattaagttaacagattggtataataattactttgtgacgaagcgtatttctatg
ttagaagtgatgttaccaagtgcaattaaagctaaatatacaaaagttttttcaattgaa
aatgatgaagcgattccggaacagttacgtctccgttttgatagtgaaggtcattatgcg
tataaagaagctcaatataatgatgatctatccgccatctctcctttattaaagcaaggt
gatattagtgaagtgacattgctttctcaaagtctcagcaaaaagaaacaacgtgctgtg
agagtggtagaaggttttgaatatgatgctgtattgggttctttagaaaagtctcaaaag
caatatgatttatatgcttatttaattgatgaacgtcatcatactgtactactgaaacaa
ttagaagcaatgaacttttcaaaatcaagtattgatacactgatgcgcaaaggctttgtg
gaaaaatacgatgcaatcgtggaacgtgatccctttgaaacgcgtgtatttgaacaagat
gaaaagcaacaactcacagctgatcaacaacaagcgtttgaagcaatacttaaaaatatt
aaggcacatgaacagagaacttttttactccatggtgtgactggttcaggaaagactgaa
gtttatttgcaaacaattgaggaagtgttgcatttagatagacaagctatgatgctagtg
ccagaaattgcattaaccccacaaatggttttaaggtttaagcaacgatttggtgacgaa
gttgccgtgctccactcaggtttgtcgaaaggtgaacgctatgatgaatggcaaaaaatc
agagatggtaaagctcgggtaagtgttggtgcacggtcaagcgtgtttgcgccatttaaa
aatttaggcatgatcattattgatgaagaacatgaatcatcttataaacaagaggattat
cctagatatcatgcacgtgatatcgcagagtggcgcagtcaatatcatcagtgcccattg
atattagggagtgccacaccaagtttagaaacatacgcgcgcgcagataagggcgtttat
gaactgttatctttaccaaacagagtcaatcaacaggcgttgccagaaattgaaatcgtt
gatatgagagctgaattaagttcaggtaatcggtctatgttttccgaacaattacgtgaa
gccattcaaactcgtttagataaacaagaacagattgtattgtttttaaaccgtcgaggc
tatgcatcatttatgttatgcagagattgtggtcatgtaccacaatgtcctaattgtgat
atctcattaacttatcacaagtcttcggatcaattgaagtgtcattattgtggtcatcaa
gaaacaccaccgagcaaatgtcctaattgtgaaagtgaacatatcagacaagttggtact
ggaacacaaagagttgaggagttattacaagaagtgttccaggaagcacgcattatacga
atggatgttgatactacatctcgtaaaggtgctcatgaaaaattattaaatgattttggc
tcaggtaaaggagatattttattaggtactcaaatgattgcgaaagggttagattttcct
aacatcacactcgtaggtgtactcaacgcggatacaatgttgaaccttcctgacttcaga
gcaagtgaacgtacttaccaattattaacgcaagtatcaggtcgtgcaggacgtcacgaa
aaagaaggtcaagtaatcattcaaacttataacccagaacattatgcgattaaagatgtt
caagaaaatgattatccggctttctttaacaaagagatgaattataggaaaataggtaaa
tatcctccttacttctttttaattaatttcactatctcacacaaagatatgaagaaagtc
atggaagcatcgaaacatattcataaaattttattacagcatttatcggataaagcatta
gtgttaggaccatcaccagcagcattatcaaggataaataatgaatatcgctttcaaatc
ttaattaaatataaaagtgaaccagcgctccacgaagcgcttaagtatttagatgattat
tatcatgaccaatatttaaaagacaagctatcgttaaaaattgatattaatccccaaatg
atgatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (26)   

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