KEGG   Streptococcus equi subsp. zooepidemicus CY: Q426_10330
Entry
Q426_10330        CDS       T03306                                 
Name
(GenBank) DNA polymerase III PolC
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
sequ  Streptococcus equi subsp. zooepidemicus CY
Pathway
sequ03030  DNA replication
sequ03430  Mismatch repair
sequ03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sequ00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Q426_10330
   03430 Mismatch repair
    Q426_10330
   03440 Homologous recombination
    Q426_10330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sequ03032]
    Q426_10330
   03400 DNA repair and recombination proteins [BR:sequ03400]
    Q426_10330
Enzymes [BR:sequ01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Q426_10330
DNA replication proteins [BR:sequ03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Q426_10330
DNA repair and recombination proteins [BR:sequ03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Q426_10330
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T DNA_pol3_finger PHP DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 tRNA_anti-codon RNase_H_2 DEDDh_C DNA_pol_A_exo1 Rv2179c-like HHH_3 Zn-ribbon_8
Other DBs
NCBI-ProteinID: AIA68463
Position
2054470..2058867
AA seq 1465 aa
MSDLFGKLMEQIEMPLEIRQSSAFSSADIIEVKVHSVSRLWEFHFSFAEVLPIDSYRELS
DRLVRTFEAADIKVTFDIKAETINYSDQLLQAYYQEAFEHEPCNGASFKSSFSRLQVRYD
HHQLIIMAPDFVNNDHFRKNHLPNLAAQFERFGFGRLAIDMVSDQEMTDHLTKDFETNRQ
ALVEKAVQDNIAAQQSLEAMQPPAEEAAPSPSLDYRERMAQRQASFDKAVITPMIEVDTE
ENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELRKFDLIAKGAWL
RVQGNIENNPFTKSLTMNVQQVKAIVHHERKDLMPEGQKRVEFHAHTNMSTMDALPTVED
LIDTAARWGHQAVAITDHANVQSFPHGYHRARKAGIKAIFGLEANIVEDKVPISFNPVAM
DLHEATYVVFDVETTGLSAMNNDLIQIAASKMFKGNIIEQFDEFINPGHPLSAFTTELTG
ITDNHLVGAKPIQQVLEAFQAFCQGTILVAHNASFDVGFMNANYDRYGLAKISQPVIDTL
ELARNLYPEYKRHGLGPLTKRFQVSLEHHHMANYDAEATGRLLFIFLKEAREKHGITNLL
QLNTDLVAEDSYKKARIKHATIYVQNQLGLKNMFKLVSLSNVKYFEGVPRIPRTVLDQHR
EGLLLGTACSDGEVFDAVLTQGIDAAVDLAKYYDFIEIMPPAIYQPLVVRELIKDQAGVE
QIIRDLIEVGRRAEKPVLATGNVHYIEPEDAIYRDIIVRSLGQGALINRTIGRGEAAKPV
PLPEAHFRTTNEMLDDFAFLGQDLAYEVVVQNTQALADRIEEVEVVKGDLYTPYIDKAEE
TVAELTYQKAFAIYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQMLVNRSNERGYLVG
SRGSVGSSFVATMIGITEVNPMPPHYVCPSCQHSEFITDGSVGSGYDLPNKACPRCGTLY
KKDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPNAHLDVRDIFGEEYAFRAGTVGTVAEK
TAYGFVKGYERDYGKFYPDAEVDRLAAGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQF
PADDVTASWQTTHFNFHDIDENVLKLDVLGHDDPTMIRKLQDLSGIDPITIPADDPDVMA
LFSGTEVLGVTPEQIGTPTGMLGIPEFGTNFVRGMVNETHPTTFAELLQLSGLSHGTDVW
LGNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGLWLKISEEERS
SYIKAMRQNNVPDWYIESCGKIKYMFPKAHAAAYVLMALRVAYFKVHHPIMYYCAYFSIR
AKAFELKTMSGGLAAVKARMEDISNKRKRNEASNVENDLFTTLEIVNEMLERGFKFGKLD
LYKSEATEFQIEGDTLIPPFIALEGLGENVARQIVKARQDGEFLSKMELRKRGGASATLV
DKMDELGILGNMPDDNQLSLFDDFF
NT seq 4398 nt   +upstreamnt  +downstreamnt
atgtcagatttattcggtaaattgatggaacaaattgaaatgccacttgagataagacaa
tcaagtgccttttcgtctgctgatattatcgaggtcaaggtgcattcagtgtctcgtctg
tgggaatttcatttttcctttgcagaggttctcccgatagatagctatcgagagctgtca
gataggcttgtgagaacctttgaggcagcagatattaaggtaacatttgacatcaaggca
gagacaattaattattcggatcagctgctgcaagcctactatcaagaagcatttgagcat
gagccctgtaatggggctagcttcaagtcatctttttctagacttcaggtcaggtatgac
catcatcagctgatcattatggcacctgactttgtgaataatgatcactttaggaaaaat
catttacccaatctggcagctcagtttgagcgctttggctttgggaggctagcgattgat
atggtgtctgatcaggagatgacagaccatttgacaaaggactttgagaccaaccgtcag
gctctggtggaaaaggctgtacaagataatatcgcagcacagcaatcattggaggccatg
cagccaccagctgaggaggcagcaccaagcccaagccttgactatagagagcgtatggct
cagcgccaagcaagctttgataaggcggtcattacaccaatgattgaggtggatacagaa
gaaaatcgcattgtttttgaaggaatggtctttgatgtggagcgcaagacgacaagaaca
ggccgccatatcatcaacttcaagatgacagattacacctcctcctttgccatgcaaaaa
tgggccaaagatgacgatgagctcagaaaatttgatctgattgcgaagggagcttggctg
cgcgttcagggaaatatcgaaaacaaccccttcaccaagagcctaaccatgaatgtgcag
caggttaaggcgattgttcaccatgagcgtaaggatctcatgccagaagggcaaaagcgt
gttgaatttcatgcacacactaatatgtccacaatggacgctctaccgacggtagaagac
ctgattgatacagcagccaggtggggacatcaggcagtagcgattactgaccacgctaat
gttcagagctttccgcatggctatcatagagcacgcaaggcaggaatcaaggcaatcttt
ggcttagaggccaatattgttgaggataaggtacctatttccttcaatcctgtcgctatg
gacctgcatgaagctacctatgttgtctttgacgtggagaccaccggcctttctgccatg
aacaatgatttgattcagatagcagcttccaaaatgttcaagggaaatatcattgagcag
tttgatgagtttatcaatccaggccaccccttatctgcttttacaacagaattgacaggg
attacagataatcatttggtaggagctaagcctatacagcaggtgctagaggcatttcag
gccttttgccagggcactatcctagttgcccacaatgctagctttgacgtgggctttatg
aatgccaactacgatcggtatggtctagcaaaaatcagccagccggttattgatacccta
gagcttgctagaaacctgtaccctgagtataagcggcatggtttaggccctttaaccaaa
cgctttcaggttagtcttgagcaccatcacatggccaattacgatgctgaagcaacaggg
cgtttgctctttatcttcctaaaggaagctagagaaaagcatggtattacaaacctgctt
cagctcaatacagacttagtggcagaggattcctataagaaggctcggatcaagcacgct
acgatctatgttcaaaatcagctaggcctcaaaaacatgtttaagctggttagcctttca
aatgtgaaatattttgaaggggtgcctagaattccaagaaccgtccttgatcagcatcgt
gaaggcttgctgcttgggacagcctgctcagacggcgaggtctttgacgctgttttgacc
caaggaattgacgctgctgttgatctggcaaaatactacgattttatcgaaatcatgccg
cctgcaatctaccagcccttggtagtccgagagctaattaaggatcaagcaggagttgag
cagattattcgcgatttgattgaggtcggccgcagagctgaaaagcctgtcctagctact
ggaaacgtgcactacattgagccagaggacgccatctatcgtgacattatcgttcgtagt
ctagggcaaggtgccctgattaaccgtactattggccgcggagaggctgccaagcctgtc
ccgctaccagaggctcattttagaacaaccaatgaaatgcttgatgattttgccttttta
ggtcaggacttagcctatgaggttgttgtgcaaaatactcaagcccttgctgatcgaatt
gaagaggtagaggttgttaagggtgatctgtataccccatatattgataaggcagaagaa
accgttgctgagctgacttatcaaaaggcctttgctatctatggcaacccacttccagat
atcattgatctgcgcattgaaaaggagctaacgtccattttgggaaacggctttgcggtg
atttacctagcctcacaaatgctggttaatcgctctaatgagcgtggttatctggtaggc
tcacgtggctctgttggttcaagctttgttgcgaccatgattggtatcacagaggtcaat
ccaatgccgcctcattatgtctgcccaagctgtcagcactcagagtttatcacagatgga
tcggtcggatctggctacgatttgccaaacaaggcctgtcctagatgtgggacgctgtac
aaaaaggacggacaggatattccttttgaaaccttccttggctttgatggtgataaggtt
ccagatattgatttgaacttctcaggagatgatcagcccaatgcccacttggacgttcgt
gatatcttcggagaagaatacgcctttcgtgcaggtactgttggtactgttgctgaaaaa
acagcctatggctttgtcaagggctatgagcgagattatggcaagttttacccagatgca
gaggttgatcgtctagctgctggtgcggctggtgtcaagcgaaccactggtcagcatcct
ggtgggatcgttgttatccctaactatatggacgtttatgattttacacctgtgcagttt
ccggcagatgatgtgacagcctcatggcaaacgacccactttaatttccatgatattgat
gaaaatgtcctaaagctcgatgtgctcggtcatgatgatcccaccatgattcgtaagctg
caggatttatcaggtattgatccgattactattccagcagatgatcctgacgtgatggca
cttttttctggaacagaggtgctcggagtgactcctgaacaaattggaacaccaacaggt
atgcttgggatcccagagtttggaacgaactttgttcgtggcatggtgaatgagacccac
ccaacgacctttgcagaattgctgcagctatcaggtctatcgcatggaacggacgtctgg
ctgggtaatgctcaggatctgatcaaagaaggcattgccaccctaaaaacagttatcggt
tgtcgagatgacatcatggtttacctcatgcatgctggtctagagcctaagatggccttt
accatcatggagcgtgtgcgtaagggactctggctaaagatctccgaggaggagcgcagc
tcctatatcaaggctatgcggcaaaacaacgtcccagactggtatatcgaatcctgtggt
aaaatcaagtacatgttccccaaggcacacgctgccgcctatgttttgatggcattgcga
gtggcttatttcaaggttcatcaccccatcatgtattactgtgcttatttctctattcgt
gccaaggcctttgagctcaaaaccatgagtggtgggctagctgctgtcaaggctcgcatg
gaggacatcagcaataagcgcaagcgcaacgaagcctcaaacgttgaaaatgacctgttt
accactttagaaattgtcaatgaaatgcttgagagagggtttaagtttggcaagctagac
ctttacaagagcgaggcaactgagtttcaaattgaaggggataccctaattccacctttt
attgccttagaaggcttgggagaaaacgttgctagacaaatcgttaaggcccgccaagat
ggtgagtttctatcaaaaatggaattacgcaagcgtggtggtgcttctgccactctagtt
gataagatggacgagctgggcattttaggaaatatgccagatgacaatcagctgagtcta
tttgatgactttttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (26)   

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