KEGG   Prodigiosinella confusarubida ATCC 39006: Ser39006_002715
Entry
Ser39006_002715   CDS       T05290                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
sera  Prodigiosinella confusarubida ATCC 39006
Pathway
sera01501  beta-Lactam resistance
sera01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:sera00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Ser39006_002715
   01503 Cationic antimicrobial peptide (CAMP) resistance
    Ser39006_002715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sera03036]
    Ser39006_002715
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sera02000]
    Ser39006_002715
   01504 Antimicrobial resistance genes [BR:sera01504]
    Ser39006_002715
Chromosome and associated proteins [BR:sera03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    Ser39006_002715
Transporters [BR:sera02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   Ser39006_002715
Antimicrobial resistance genes [BR:sera01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    Ser39006_002715
SSDB
Motif
Pfam: HlyD_D23 CusB_dom_1 HlyD_3 Biotin_lipoyl_2
Other DBs
NCBI-ProteinID: AUH03140
UniProt: A0A2I5T2Q0
Position
587207..588340
AA seq 377 aa
MRYTLSVLFLSMLLIACDRSTNNGAPAAPVPHVSVVTLKTQPITLFASLPGRTTAVRSAE
VRPQVDGIILKRLFTEGTEVKAGQQLYQIDPASYQAAYDKAVATYINAESVVKRYKPLAA
AHAVSAQTYDDAVATAAEAKADVQTARVNLEYTKVRAPISGRIGRSLFTEGALVTNGQSS
YLTTISQLDPIYVDVSESSLELLRLRRALREGKLKAPSNHEAAVRLILEDGSSYNQEGRL
DFSEVTVDEGTGSVTLRATFPNPHHVLLPGMFVHARLVQGVQEEGILAPQEAIGHDIKGR
PYAYVVKTDNTVEQRYITTGEMSNGQWQVTSGLSAGEKVVTEGIQNIHTGMKVSSSEQSK
TDDSNTVQLSMTDPSAQ
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgcggtatacattatcagtactttttctgagcatgctgctgatcgcctgcgatcgttct
accaacaatggggcgccagcagcaccggtgcctcatgttagcgttgtaacgcttaaaacc
cagcccataaccttgttcgcaagtctgcccggccgcacaaccgcggtacgcagcgctgaa
gtgcggccgcaggtggatggcattattcttaaacgactgtttaccgaaggtaccgaggtc
aaggccggtcaacagctgtatcagatcgatcccgccagctatcaggccgcttatgacaaa
gcggtagcgacttatattaacgccgaatcagtggtcaagcgctacaagccactcgccgcc
gcccacgcggtgagcgcccagacttatgacgacgcggtggctaccgccgccgaagccaag
gccgatgtgcaaaccgcgcgcgtgaatctggaatacactaaggttcgtgcaccgatatcc
ggacgcatcggtcgttcactctttaccgagggggccttggtcaccaatggccagagtagc
tatctcaccaccatctcccagcttgatccgatctatgtcgacgtcagtgagtcatcactg
gaactgctgcgcctgcggcgtgcgctgagagagggaaagctaaaagcgccgagtaaccat
gaggctgcggtgcgacttatacttgaagatggcagcagttataaccaggaaggacggtta
gatttctccgaagtgaccgtggatgaaggcaccggctcggtcacgttgcgcgccactttc
cctaacccacatcatgtcctgcttcccggcatgttcgtccatgcccgtctggtgcaaggc
gttcaggaagagggcattctggcacctcaagaggccatcggccatgacatcaagggccgt
ccttatgcctatgtagtcaaaactgacaacactgtcgagcaacgttatatcactacaggt
gagatgagcaatggtcagtggcaggtcaccagtggcctcagtgctggtgaaaaagtggtc
actgaaggcatccagaatatccatactggcatgaaagtttcctccagcgagcagagcaag
acggatgattccaataccgtccaattatccatgaccgatccgtcggcgcaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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