KEGG   Prodigiosinella confusarubida ATCC 39006: Ser39006_006195
Entry
Ser39006_006195   CDS       T05290                                 
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
  KO
K02535  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
Organism
sera  Prodigiosinella confusarubida ATCC 39006
Pathway
sera00540  Lipopolysaccharide biosynthesis
sera01100  Metabolic pathways
Module
sera_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:sera00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    Ser39006_006195 (lpxC)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:sera01005]
    Ser39006_006195 (lpxC)
Enzymes [BR:sera01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.108  UDP-3-O-acyl-N-acetylglucosamine deacetylase
     Ser39006_006195 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:sera01005]
 Lipid A
  Ser39006_006195 (lpxC)
SSDB
Motif
Pfam: LpxC
Other DBs
NCBI-ProteinID: AUH03759
UniProt: A0A2I5T4I3
Position
1340340..1341257
AA seq 305 aa
MIKQRTLKRIVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIDVDAPEIPIMDGSASPFVYLLLDAGI
EELNCAKKFVRIKQPVRVEDGDKWAELTPFNGFSLDFTIDFNHPAIGAGSQRYCLDFSAD
AFVRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFDDEFVRHKM
LDAIGDLFMCGHNIIGAFTAFKSGHALNNKLLQAVLAKQEAWEYVTFENEAEMPLAFKAP
STVLA
NT seq 918 nt   +upstreamnt  +downstreamnt
atgatcaaacaacgaactttaaagcgtattgtacaggcgacaggggtcggtttgcatacc
ggcaagaaagtcaccttgactatgcgccctgcaccggctaataccggggtcatctatcgc
cgtactgacttgaatccaccggttgattttccggctgacgcaaaatcagtgcgtgatacc
atgctttgtacttgcttggttaatgagcatgatgttcgtatttctacagtagaacatctg
aatgccgcgctcgctggcttgggcattgataacattgttattgatgttgatgcacctgaa
attccaatcatggatggcagcgccagcccatttgtttatttactgttggatgcgggtatt
gaagagctgaactgtgctaaaaagttcgttcgaatcaaacagcctgtgcgtgttgaagac
ggtgataaatgggctgagttgacaccatttaatggttttagcttggattttaccatcgac
tttaatcacccagcgattggtgccggttctcagcgttattgtctggatttttccgctgat
gcttttgttcgtcagatcagcagggcacgcacgtttggctttatgcgtgatattgaatat
ctgcagtctcgagggttgtgcctgggcggcagtttcgattgcgctatcgtcgttgatgat
tatcgtgtcttaaatgaagatggtttgcgttttgatgatgaatttgtccgtcacaaaatg
ttagacgcgattggtgatttgtttatgtgtggtcataacatcatcggtgcattcacggca
tttaagtcaggtcacgcgcttaacaacaagctgttgcaggctgtgctggcgaaacaggaa
gcatgggaatatgtcacctttgaaaacgaggctgaaatgcctttggctttcaaagcacct
tctactgtgttggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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