KEGG   Serratia sp. FS14: L085_12045
Entry
L085_12045        CDS       T03313                                 
Name
(GenBank) endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
serf  Serratia sp. FS14
Pathway
serf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:serf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    L085_12045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:serf03400]
    L085_12045
Enzymes [BR:serf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     L085_12045
DNA repair and recombination proteins [BR:serf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     L085_12045
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AIA47844
Position
complement(2653179..2654018)
AA seq 279 aa
MKFVGAHVSASGGVDQAVIRAHELEATAFALFTKNQRQWKAAPLAADVIDKFKSACAQYG
FGPGQILPHDSYLINLGHPVAEALEKSREAFIDELQRCEQLGLTLLNFHPGSHLLQIDED
KCLARIAESINIALDKTAGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTEETCEHTFKQLGDIVGFNYLRGMHLNDAKSEFNSRVDRHHSLGEGNIG
KTVFSYIMRDPRFDNIPLILETVNPDIWAEEIAWLKAQQ
NT seq 840 nt   +upstreamnt  +downstreamnt
atgaagtttgtcggtgcacatgtcagcgcgtcaggcggcgtggatcaggcggttatccgc
gcgcacgaattggaggcgaccgcgttcgccctgttcaccaaaaatcagcgtcaatggaag
gccgcgccgctggccgcggacgtgatcgataagttcaagagcgcctgcgcccagtacggc
ttcgggccggggcagatcctgccgcacgacagctacctgatcaacctcgggcatccggtg
gccgaggcgttggaaaaatcgcgcgaagcgtttatcgacgagctgcagcgctgcgaacag
ctggggctgacgctgttgaacttccaccccggcagccacctgctgcaaatcgatgaagat
aaatgcctggcgcgcatcgccgaatcgatcaacatcgcgctggacaaaaccgccggtgtg
acggccgtgatcgaaaacaccgccggccagggcagcaatctgggcttcaaattcgaacac
ctggcggcgatcatcgacggcgtagaagacaaaagccgcgtcggcgtctgcatcgacacc
tgccacgctttcgccgccggttacgatctgcgcaccgaagagacctgcgaacacaccttc
aaacagctcggtgacatcgtcggtttcaactacctgcgcggcatgcacctgaacgacgcc
aagagcgagttcaacagccgcgtcgaccgccaccacagcctgggggaaggcaacatcggc
aaaacggtgttcagctacatcatgcgcgatccgcgtttcgacaatatcccgctgattctg
gaaacggtaaacccggatatctgggcggaagagatcgcctggctgaaggcgcagcagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system