KEGG   Serratia sp. FS14: L085_22580
Entry
L085_22580        CDS       T03313                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
serf  Serratia sp. FS14
Pathway
serf03030  DNA replication
serf03430  Mismatch repair
serf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:serf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    L085_22580 (holA)
   03430 Mismatch repair
    L085_22580 (holA)
   03440 Homologous recombination
    L085_22580 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:serf03032]
    L085_22580 (holA)
   03400 DNA repair and recombination proteins [BR:serf03400]
    L085_22580 (holA)
Enzymes [BR:serf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     L085_22580 (holA)
DNA replication proteins [BR:serf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     L085_22580 (holA)
DNA repair and recombination proteins [BR:serf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     L085_22580 (holA)
SSDB
Motif
Pfam: DNA_pol3_delt_C DNA_pol3_delta DNA_pol3_delta_C
Other DBs
NCBI-ProteinID: AIA49913
Position
4899355..4900389
AA seq 344 aa
MIRIYPEQLAAQLREGLRACYLLSGNEPLLLQESQDLLRQAAQQQQFSEHYSISLDAHTD
WDAIFGICQAMSLFASRQTLLLIFPENGPTAPIGEQLTKLATLLHEDILLILRGPRLTKA
QENSAWFKALSPHGALVSCQTPEQAQLPRWVAARAKSMKLELDDAANQLLCYCYEGNLLA
LSQALERLSLLHPDGKLTLPRVEQAVNDAAHFTPFHWLDALLAGKSKRAWHILQQLQQED
VEPVILLRTLQRELLLLLTLQRRMASAPLRSLFDQHKVWQNRRPLVTQALQRLSGPQLQQ
AVQLLTQIELTLKQDYGQSVWPELETLSMLLCGKPLATSFSDAH
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgatccgtatttatccggaacaacttgccgcgcagctccgagaggggctgcgcgcttgt
tatttattgagcggcaatgaaccgctgctgctgcaggaaagccaggatttactccggcag
gccgcgcaacagcagcagttcagcgagcactacagcatttccctcgacgcccatactgac
tgggacgccatcttcggcatctgccaggcgatgagcctgttcgccagccgccagacgctg
ctgctgatcttcccggaaaacggcccgacggcgccgatcggcgaacagctgaccaagctc
gccacgctgctgcacgaggatattctgctgatcctgcgcggcccgcgcctcaccaaagcg
caggaaaacagcgcctggttcaaggcgctcagcccgcacggcgctctcgtcagttgccag
acgcctgaacaggcgcagctgccgcgctgggtcgccgcgcgcgccaagtcgatgaaactg
gagttggacgacgcggccaatcagctgctgtgctactgctacgaaggtaacctgctggcg
ctgtcgcaggcgctggagcggctgtcgctgctgcacccggacggcaagctcacgctgccg
cgcgtcgaacaggcggtgaacgacgccgcccacttcacgccgttccactggctggacgcc
ctgctggccggtaagagcaagcgcgcctggcatattttgcagcagctgcagcaagaggac
gtggagccggtgatcctgctgcgcaccctgcagcgcgaactgctgctgctgctgacgctg
cagcgccgcatggcttccgcgccgctgcgctcgctgttcgatcagcacaaggtctggcag
aaccgccgcccgttggtgacccaggcgttgcaacgcctgtccggcccccagctgcagcag
gcggtacagctgctgacgcaaatcgagctgaccctcaagcaggactatggccagtcggtc
tggccggaactggaaaccctgtcgatgctgctgtgcggcaaacccctggccacgagtttt
agcgatgcccactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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