KEGG   Serratia sp. MYb239: CLM71_03480
Entry
CLM71_03480       CDS       T05477                                 
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
serm  Serratia sp. MYb239
Pathway
serm00470  D-Amino acid metabolism
serm00550  Peptidoglycan biosynthesis
serm01100  Metabolic pathways
serm01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:serm00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CLM71_03480 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    CLM71_03480 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    CLM71_03480 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:serm01011]
    CLM71_03480 (ddl)
Enzymes [BR:serm01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     CLM71_03480 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:serm01011]
 Precursor biosynthesis
  Amino acid ligase
   CLM71_03480 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp_3 ATP-grasp_4 ATP-grasp RimK ATPgrasp_Ter TTL ATPgrasp_ST ATPgrasp_YheCD GARS_A
Other DBs
NCBI-ProteinID: AVJ16260
Position
753360..754280
AA seq 306 aa
MTEKVAVLLGGTSAERDVSLQSGAAVLAGLREAGIDAHGVDTRDFPVSQLKAQGFSKVFI
ALHGRGGEDGTLQGMLEFLELPYTGSGVMASALTMDKWRTKLVWQSLGLPIAPYVALHRA
GFSGDDKHQALANIEALGLPLIVKPSREGSSVGMSKVESFGALEAALEEAFRHDDDVLVE
KWLSGPEYTVAFIGDSVMPSIRIQPAGVFYDYQAKYIADDTQYFCPSGLSAEQEAELAAL
AVRAYRALDCSGWGRVDVMQDNDGSFYLLEVNTSPGMTSHSLVPMAARQFGLSFSQLVAR
ILELAD
NT seq 921 nt   +upstreamnt  +downstreamnt
atgactgagaaagtcgccgtcctgctgggtggcacctctgctgaacgtgatgtttccctg
cagtccggcgcggcggtgctggccggtctgcgcgaagccggcattgacgctcacggcgtc
gatacccgcgacttcccggtgtcgcagctcaaggcgcagggctttagcaaagtatttatc
gcgctgcacgggcgcggcggcgaggacggcaccctgcaggggatgctggagttcctggaa
ttgccgtataccggtagcggcgtgatggcctcggcgctgaccatggacaaatggcgcacc
aagctggtatggcagtcgctgggcctgccgatcgccccttacgtggcgctgcatcgtgcg
ggttttagcggcgatgacaagcatcaggcgctggcgaacatcgaagctctggggctgccg
ctgatcgtcaagccaagccgcgaaggctccagcgtcggcatgagcaaggttgagtcattc
ggtgcgcttgaagcggcgctggaagaggccttccgccacgatgacgacgtgctggtggag
aaatggctgagcggcccggagtacaccgtggcgtttatcggcgacagcgtgatgccgtcg
attcgcattcagccggccggtgtgttttacgactaccaggcgaaatacattgcggacgat
acgcagtatttctgcccgagcggtttgtcggccgagcaggaggctgaactggccgcgctg
gcggtacgcgcctaccgtgcgctggactgcagcggctggggccgcgttgatgtaatgcag
gataacgatggcagcttctatctgctcgaggtgaacacctcgccgggcatgaccagtcat
agcctggtgccgatggcagcacgccagtttggattaagcttctcgcaactggtggcgaga
attttggaattggccgactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (30)   

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